Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.01□□□□□ -0.33
CXCL5P42830 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
CXCL5P42830 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 AL049812.1-201ENST00000432563 2267 ntBASIC13.01□□□□□ -0.33
CXCL5P42830 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
CXCL5P42830 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13□□□□□ -0.33
CXCL5P42830 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CXCL5P42830 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13□□□□□ -0.33
CXCL5P42830 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13□□□□□ -0.33
CXCL5P42830 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CXCL5P42830 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
CXCL5P42830 AC016405.3-201ENST00000607710 860 ntBASIC13□□□□□ -0.33
CXCL5P42830 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13□□□□□ -0.33
CXCL5P42830 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CXCL5P42830 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13□□□□□ -0.33
CXCL5P42830 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CXCL5P42830 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13□□□□□ -0.33
CXCL5P42830 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13□□□□□ -0.33
CXCL5P42830 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CXCL5P42830 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.99□□□□□ -0.33
CXCL5P42830 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC12.99□□□□□ -0.33
CXCL5P42830 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC12.99□□□□□ -0.33
CXCL5P42830 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 GCK-205ENST00000437084 1385 ntTSL 5 BASIC12.99□□□□□ -0.33
CXCL5P42830 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CXCL5P42830 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC12.99□□□□□ -0.33
CXCL5P42830 AC069236.1-201ENST00000604339 616 ntBASIC12.99□□□□□ -0.33
CXCL5P42830 AL589743.5-201ENST00000616611 1050 ntBASIC12.99□□□□□ -0.33
CXCL5P42830 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CXCL5P42830 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.99□□□□□ -0.33
CXCL5P42830 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC12.99□□□□□ -0.33
CXCL5P42830 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CXCL5P42830 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CXCL5P42830 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CXCL5P42830 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC12.99□□□□□ -0.33
CXCL5P42830 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CXCL5P42830 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CXCL5P42830 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL5P42830 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL5P42830 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL5P42830 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL5P42830 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL5P42830 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
CXCL5P42830 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CXCL5P42830 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL5P42830 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL5P42830 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL5P42830 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCL5P42830 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CXCL5P42830 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL5P42830 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCL5P42830 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCL5P42830 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCL5P42830 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL5P42830 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL5P42830 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCL5P42830 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL5P42830 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCL5P42830 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL5P42830 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC12.98□□□□□ -0.33
CXCL5P42830 AC008694.1-202ENST00000636953 945 ntBASIC12.98□□□□□ -0.33
CXCL5P42830 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL5P42830 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms