Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
MMP8P22894 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.33■□□□□ 0.85
MMP8P22894 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MMP8P22894 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
MMP8P22894 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MMP8P22894 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
MMP8P22894 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.33■□□□□ 0.84
MMP8P22894 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.84
MMP8P22894 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MMP8P22894 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP8P22894 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP8P22894 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP8P22894 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP8P22894 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP8P22894 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP8P22894 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP8P22894 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.32■□□□□ 0.84
MMP8P22894 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP8P22894 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP8P22894 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP8P22894 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP8P22894 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP8P22894 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP8P22894 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.32■□□□□ 0.84
MMP8P22894 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.32■□□□□ 0.84
MMP8P22894 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.32■□□□□ 0.84
MMP8P22894 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.32■□□□□ 0.84
MMP8P22894 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP8P22894 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.32■□□□□ 0.84
MMP8P22894 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
MMP8P22894 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
MMP8P22894 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP8P22894 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP8P22894 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
MMP8P22894 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
MMP8P22894 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP8P22894 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MMP8P22894 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP8P22894 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP8P22894 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
MMP8P22894 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP8P22894 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MMP8P22894 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP8P22894 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.31■□□□□ 0.84
MMP8P22894 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.31■□□□□ 0.84
MMP8P22894 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.31■□□□□ 0.84
MMP8P22894 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MMP8P22894 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.31■□□□□ 0.84
MMP8P22894 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.31■□□□□ 0.84
MMP8P22894 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MMP8P22894 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MMP8P22894 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.31■□□□□ 0.84
MMP8P22894 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.3■□□□□ 0.84
MMP8P22894 AL049812.1-201ENST00000432563 2267 ntBASIC20.3■□□□□ 0.84
MMP8P22894 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP8P22894 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP8P22894 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MMP8P22894 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP8P22894 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP8P22894 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP8P22894 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP8P22894 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MMP8P22894 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.3■□□□□ 0.84
MMP8P22894 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
MMP8P22894 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.3■□□□□ 0.84
MMP8P22894 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP8P22894 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.3■□□□□ 0.84
MMP8P22894 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
MMP8P22894 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
MMP8P22894 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP8P22894 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP8P22894 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
MMP8P22894 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MMP8P22894 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.3■□□□□ 0.84
MMP8P22894 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.3■□□□□ 0.84
MMP8P22894 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
MMP8P22894 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP8P22894 TNXA-203ENST00000507684 2038 ntBASIC20.29■□□□□ 0.84
MMP8P22894 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP8P22894 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP8P22894 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
MMP8P22894 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP8P22894 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
MMP8P22894 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP8P22894 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP8P22894 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
MMP8P22894 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.29■□□□□ 0.84
MMP8P22894 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP8P22894 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MMP8P22894 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP8P22894 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP8P22894 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.28■□□□□ 0.84
MMP8P22894 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP8P22894 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP8P22894 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP8P22894 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP8P22894 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP8P22894 IRX1P1-201ENST00000438849 1838 ntBASIC20.28■□□□□ 0.84
MMP8P22894 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.28■□□□□ 0.84
MMP8P22894 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms