Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 LINC01023-201ENST00000606054 436 ntBASIC18.49■□□□□ 0.55
SNRNP200O75643 AC012306.2-201ENST00000609350 630 ntBASIC18.49■□□□□ 0.55
SNRNP200O75643 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP200O75643 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
SNRNP200O75643 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SNRNP200O75643 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SNRNP200O75643 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP200O75643 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP200O75643 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP200O75643 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP200O75643 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SNRNP200O75643 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP200O75643 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP200O75643 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP200O75643 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.49■□□□□ 0.55
SNRNP200O75643 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.49■□□□□ 0.55
SNRNP200O75643 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.49■□□□□ 0.55
SNRNP200O75643 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.49■□□□□ 0.55
SNRNP200O75643 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP200O75643 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.49■□□□□ 0.55
SNRNP200O75643 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SNRNP200O75643 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP200O75643 AC093484.2-201ENST00000580996 2166 ntBASIC18.48■□□□□ 0.55
SNRNP200O75643 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.48■□□□□ 0.55
SNRNP200O75643 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.48■□□□□ 0.55
SNRNP200O75643 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP200O75643 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP200O75643 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP200O75643 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP200O75643 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
SNRNP200O75643 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SNRNP200O75643 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.48■□□□□ 0.55
SNRNP200O75643 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.48■□□□□ 0.55
SNRNP200O75643 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.48■□□□□ 0.55
SNRNP200O75643 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.48■□□□□ 0.55
SNRNP200O75643 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP200O75643 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SNRNP200O75643 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP200O75643 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.48■□□□□ 0.55
SNRNP200O75643 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP200O75643 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP200O75643 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP200O75643 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.48■□□□□ 0.55
SNRNP200O75643 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNRNP200O75643 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP200O75643 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.47■□□□□ 0.55
SNRNP200O75643 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.47■□□□□ 0.55
SNRNP200O75643 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SNRNP200O75643 AP000525.1-201ENST00000608286 694 ntBASIC18.47■□□□□ 0.55
SNRNP200O75643 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP200O75643 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP200O75643 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP200O75643 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SNRNP200O75643 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP200O75643 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP200O75643 TEX21P-204ENST00000641479 1693 ntBASIC18.47■□□□□ 0.55
SNRNP200O75643 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SNRNP200O75643 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP200O75643 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.47■□□□□ 0.55
SNRNP200O75643 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP200O75643 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP200O75643 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.47■□□□□ 0.55
SNRNP200O75643 TSPY23P-201ENST00000440136 739 ntBASIC18.47■□□□□ 0.55
SNRNP200O75643 RN7SL850P-201ENST00000579959 291 ntBASIC18.47■□□□□ 0.55
SNRNP200O75643 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.47■□□□□ 0.55
SNRNP200O75643 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP200O75643 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SNRNP200O75643 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP200O75643 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNRNP200O75643 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
SNRNP200O75643 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SNRNP200O75643 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.46■□□□□ 0.55
SNRNP200O75643 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.46■□□□□ 0.55
SNRNP200O75643 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.46■□□□□ 0.55
SNRNP200O75643 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP200O75643 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP200O75643 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP200O75643 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.46■□□□□ 0.55
SNRNP200O75643 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
SNRNP200O75643 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP200O75643 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.46■□□□□ 0.55
SNRNP200O75643 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP200O75643 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.46■□□□□ 0.55
SNRNP200O75643 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.46■□□□□ 0.55
SNRNP200O75643 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.46■□□□□ 0.55
SNRNP200O75643 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SNRNP200O75643 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP200O75643 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP200O75643 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.46■□□□□ 0.55
SNRNP200O75643 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP200O75643 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP200O75643 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.46■□□□□ 0.55
SNRNP200O75643 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
SNRNP200O75643 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.46■□□□□ 0.55
SNRNP200O75643 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP200O75643 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP200O75643 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNRNP200O75643 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.46■□□□□ 0.55
SNRNP200O75643 AC011298.2-201ENST00000617989 482 ntBASIC18.46■□□□□ 0.55
SNRNP200O75643 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms