Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.31■□□□□ 0.36
PFDN1O60925 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PFDN1O60925 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.31■□□□□ 0.36
PFDN1O60925 TSPY26P-202ENST00000565928 3884 ntBASIC17.31■□□□□ 0.36
PFDN1O60925 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PFDN1O60925 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.31■□□□□ 0.36
PFDN1O60925 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PFDN1O60925 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
PFDN1O60925 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.31■□□□□ 0.36
PFDN1O60925 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.31■□□□□ 0.36
PFDN1O60925 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.31■□□□□ 0.36
PFDN1O60925 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PFDN1O60925 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PFDN1O60925 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PFDN1O60925 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PFDN1O60925 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.3■□□□□ 0.36
PFDN1O60925 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.3■□□□□ 0.36
PFDN1O60925 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.3■□□□□ 0.36
PFDN1O60925 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 PCDH8P1-201ENST00000428983 2773 ntBASIC17.3■□□□□ 0.36
PFDN1O60925 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
PFDN1O60925 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PFDN1O60925 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PFDN1O60925 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.3■□□□□ 0.36
PFDN1O60925 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PFDN1O60925 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN1O60925 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PFDN1O60925 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN1O60925 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.29■□□□□ 0.36
PFDN1O60925 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PFDN1O60925 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
PFDN1O60925 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
PFDN1O60925 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PFDN1O60925 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PFDN1O60925 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PFDN1O60925 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.28■□□□□ 0.36
PFDN1O60925 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PFDN1O60925 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PFDN1O60925 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.28■□□□□ 0.36
PFDN1O60925 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PFDN1O60925 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PFDN1O60925 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PFDN1O60925 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
PFDN1O60925 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PFDN1O60925 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PFDN1O60925 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PFDN1O60925 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PFDN1O60925 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.28■□□□□ 0.36
PFDN1O60925 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms