Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH7O60245 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDH7O60245 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDH7O60245 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH7O60245 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH7O60245 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH7O60245 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PCDH7O60245 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDH7O60245 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH7O60245 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH7O60245 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PCDH7O60245 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH7O60245 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH7O60245 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDH7O60245 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDH7O60245 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDH7O60245 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH7O60245 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH7O60245 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH7O60245 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
PCDH7O60245 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH7O60245 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH7O60245 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
PCDH7O60245 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH7O60245 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH7O60245 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH7O60245 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH7O60245 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH7O60245 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH7O60245 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH7O60245 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
PCDH7O60245 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH7O60245 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDH7O60245 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH7O60245 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDH7O60245 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.43■□□□□ 0.54
PCDH7O60245 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDH7O60245 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.43■□□□□ 0.54
PCDH7O60245 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
PCDH7O60245 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH7O60245 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PCDH7O60245 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDH7O60245 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH7O60245 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH7O60245 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDH7O60245 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH7O60245 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH7O60245 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PCDH7O60245 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDH7O60245 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDH7O60245 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH7O60245 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH7O60245 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH7O60245 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH7O60245 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH7O60245 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH7O60245 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH7O60245 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PCDH7O60245 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH7O60245 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH7O60245 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH7O60245 AC026366.1-201ENST00000488803 879 ntBASIC18.42■□□□□ 0.54
PCDH7O60245 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.42■□□□□ 0.54
PCDH7O60245 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH7O60245 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDH7O60245 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PCDH7O60245 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDH7O60245 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH7O60245 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH7O60245 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH7O60245 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH7O60245 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH7O60245 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH7O60245 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH7O60245 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH7O60245 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PCDH7O60245 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDH7O60245 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH7O60245 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH7O60245 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH7O60245 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH7O60245 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH7O60245 NBPF21P-201ENST00000425093 1451 ntBASIC18.41■□□□□ 0.54
PCDH7O60245 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH7O60245 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
PCDH7O60245 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PCDH7O60245 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH7O60245 KRT17P3-201ENST00000420566 1262 ntBASIC18.41■□□□□ 0.54
PCDH7O60245 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH7O60245 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDH7O60245 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDH7O60245 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDH7O60245 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH7O60245 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH7O60245 AC069544.1-201ENST00000609399 999 ntBASIC18.41■□□□□ 0.54
PCDH7O60245 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDH7O60245 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH7O60245 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDH7O60245 AL161938.1-201ENST00000569833 2180 ntBASIC18.41■□□□□ 0.54
PCDH7O60245 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms