Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRICKLE3O43900 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRICKLE3O43900 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRICKLE3O43900 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.57■□□□□ 0.56
PRICKLE3O43900 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.57■□□□□ 0.56
PRICKLE3O43900 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.57■□□□□ 0.56
PRICKLE3O43900 AL355075.4-201ENST00000554988 638 ntBASIC18.57■□□□□ 0.56
PRICKLE3O43900 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.57■□□□□ 0.56
PRICKLE3O43900 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.57■□□□□ 0.56
PRICKLE3O43900 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.57■□□□□ 0.56
PRICKLE3O43900 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRICKLE3O43900 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
PRICKLE3O43900 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRICKLE3O43900 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRICKLE3O43900 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRICKLE3O43900 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.57■□□□□ 0.56
PRICKLE3O43900 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
PRICKLE3O43900 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRICKLE3O43900 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRICKLE3O43900 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PRICKLE3O43900 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.57■□□□□ 0.56
PRICKLE3O43900 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PRICKLE3O43900 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRICKLE3O43900 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRICKLE3O43900 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.56■□□□□ 0.56
PRICKLE3O43900 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.56■□□□□ 0.56
PRICKLE3O43900 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.56■□□□□ 0.56
PRICKLE3O43900 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.56■□□□□ 0.56
PRICKLE3O43900 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.56■□□□□ 0.56
PRICKLE3O43900 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRICKLE3O43900 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.56■□□□□ 0.56
PRICKLE3O43900 AC004951.3-201ENST00000418645 1148 ntBASIC18.56■□□□□ 0.56
PRICKLE3O43900 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.56■□□□□ 0.56
PRICKLE3O43900 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PRICKLE3O43900 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.56■□□□□ 0.56
PRICKLE3O43900 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.56■□□□□ 0.56
PRICKLE3O43900 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRICKLE3O43900 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRICKLE3O43900 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.56■□□□□ 0.56
PRICKLE3O43900 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.56■□□□□ 0.56
PRICKLE3O43900 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PRICKLE3O43900 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.56■□□□□ 0.56
PRICKLE3O43900 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRICKLE3O43900 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRICKLE3O43900 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRICKLE3O43900 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRICKLE3O43900 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PRICKLE3O43900 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRICKLE3O43900 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PRICKLE3O43900 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRICKLE3O43900 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRICKLE3O43900 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PRICKLE3O43900 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.55■□□□□ 0.56
PRICKLE3O43900 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRICKLE3O43900 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.55■□□□□ 0.56
PRICKLE3O43900 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PRICKLE3O43900 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PRICKLE3O43900 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRICKLE3O43900 AC093484.2-201ENST00000580996 2166 ntBASIC18.55■□□□□ 0.56
PRICKLE3O43900 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.55■□□□□ 0.56
PRICKLE3O43900 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.54■□□□□ 0.56
PRICKLE3O43900 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.54■□□□□ 0.56
PRICKLE3O43900 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE3O43900 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE3O43900 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE3O43900 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.54■□□□□ 0.56
PRICKLE3O43900 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE3O43900 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.54■□□□□ 0.56
PRICKLE3O43900 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE3O43900 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PRICKLE3O43900 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.54■□□□□ 0.56
PRICKLE3O43900 RBM17P1-201ENST00000453646 1190 ntBASIC18.54■□□□□ 0.56
PRICKLE3O43900 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE3O43900 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.54■□□□□ 0.56
PRICKLE3O43900 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.54■□□□□ 0.56
PRICKLE3O43900 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PRICKLE3O43900 AP000692.2-201ENST00000608391 879 ntBASIC18.54■□□□□ 0.56
PRICKLE3O43900 AC011298.2-201ENST00000617989 482 ntBASIC18.54■□□□□ 0.56
PRICKLE3O43900 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.54■□□□□ 0.56
PRICKLE3O43900 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE3O43900 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE3O43900 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE3O43900 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE3O43900 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE3O43900 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRICKLE3O43900 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE3O43900 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PRICKLE3O43900 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE3O43900 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE3O43900 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE3O43900 AC079598.2-202ENST00000546624 1451 ntBASIC18.53■□□□□ 0.56
PRICKLE3O43900 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.53■□□□□ 0.56
PRICKLE3O43900 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.53■□□□□ 0.56
PRICKLE3O43900 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE3O43900 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.53■□□□□ 0.56
PRICKLE3O43900 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE3O43900 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
PRICKLE3O43900 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRICKLE3O43900 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.53■□□□□ 0.56
PRICKLE3O43900 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms