Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPEO14579 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPEO14579 KRT17P1-201ENST00000399211 1546 ntBASIC19.31■□□□□ 0.68
COPEO14579 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.31■□□□□ 0.68
COPEO14579 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
COPEO14579 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.31■□□□□ 0.68
COPEO14579 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
COPEO14579 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
COPEO14579 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.31■□□□□ 0.68
COPEO14579 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPEO14579 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
COPEO14579 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPEO14579 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.31■□□□□ 0.68
COPEO14579 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPEO14579 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
COPEO14579 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.31■□□□□ 0.68
COPEO14579 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.31■□□□□ 0.68
COPEO14579 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPEO14579 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPEO14579 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.31■□□□□ 0.68
COPEO14579 AC011767.1-201ENST00000617410 1153 ntBASIC19.31■□□□□ 0.68
COPEO14579 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPEO14579 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.31■□□□□ 0.68
COPEO14579 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.31■□□□□ 0.68
COPEO14579 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPEO14579 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPEO14579 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.31■□□□□ 0.68
COPEO14579 TFP1-202ENST00000475455 1573 ntBASIC19.31■□□□□ 0.68
COPEO14579 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPEO14579 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPEO14579 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPEO14579 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPEO14579 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.31■□□□□ 0.68
COPEO14579 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPEO14579 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPEO14579 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPEO14579 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPEO14579 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPEO14579 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.3■□□□□ 0.68
COPEO14579 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
COPEO14579 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPEO14579 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COPEO14579 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
COPEO14579 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.3■□□□□ 0.68
COPEO14579 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.3■□□□□ 0.68
COPEO14579 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.3■□□□□ 0.68
COPEO14579 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.3■□□□□ 0.68
COPEO14579 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.3■□□□□ 0.68
COPEO14579 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COPEO14579 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPEO14579 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.3■□□□□ 0.68
COPEO14579 OR10C1-204ENST00000622521 1039 ntBASIC19.3■□□□□ 0.68
COPEO14579 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.3■□□□□ 0.68
COPEO14579 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPEO14579 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPEO14579 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPEO14579 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPEO14579 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.29■□□□□ 0.68
COPEO14579 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.29■□□□□ 0.68
COPEO14579 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.29■□□□□ 0.68
COPEO14579 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.29■□□□□ 0.68
COPEO14579 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
COPEO14579 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.29■□□□□ 0.68
COPEO14579 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.29■□□□□ 0.68
COPEO14579 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.29■□□□□ 0.68
COPEO14579 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COPEO14579 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
COPEO14579 AC079598.2-202ENST00000546624 1451 ntBASIC19.28■□□□□ 0.68
COPEO14579 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.28■□□□□ 0.68
COPEO14579 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPEO14579 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPEO14579 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPEO14579 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPEO14579 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COPEO14579 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPEO14579 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COPEO14579 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COPEO14579 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPEO14579 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COPEO14579 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
COPEO14579 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.28■□□□□ 0.68
COPEO14579 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPEO14579 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.28■□□□□ 0.68
COPEO14579 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms