Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 SPATA13-204ENST00000399949 3026 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
KRTAP4-4Q9BYR3 TTC5-201ENST00000258821 4779 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 CNDP1-203ENST00000582365 4111 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 SMG6-202ENST00000354901 3473 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 RASGEF1B-213ENST00000613784 3485 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 AC012464.3-201ENST00000604017 2773 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 GLI1-207ENST00000543426 3394 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 AC092132.2-201ENST00000611227 2744 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 TIMP2-203ENST00000585421 3345 ntTSL 3 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 PARD6G-AS1-202ENST00000586421 3333 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ENPP6-201ENST00000296741 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ZEB2-245ENST00000638087 9339 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 BICD1-201ENST00000281474 3281 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ZBBX-203ENST00000392766 3250 ntAPPRIS P3 TSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ASTE1-201ENST00000264992 2664 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 DIS3L2-204ENST00000409307 2658 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ZSCAN5C-201ENST00000376267 1491 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 BTN2A2-201ENST00000352867 3241 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 SUFU-203ENST00000423559 2601 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ANO2-201ENST00000327087 3720 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 KCNMA1-240ENST00000638575 3720 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 KCNMA1-245ENST00000638759 3723 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 KCNMA1-264ENST00000639544 3711 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ZEB2-229ENST00000629520 2564 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 MAPK10-240ENST00000639175 2596 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 BX005214.3-201ENST00000615174 1988 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 AL353770.3-201ENST00000616253 1988 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 M1AP-209ENST00000536235 2531 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 RARB-201ENST00000330688 3084 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 SCYL3-203ENST00000367772 3090 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 AC132825.3-201ENST00000562182 4710 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 AK2-202ENST00000373449 3586 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 AL645730.1-201ENST00000622945 1901 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 KIAA1524-201ENST00000295746 4075 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 HRH2-204ENST00000636584 4067 ntTSL 3 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 PAN2-203ENST00000440411 4576 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 AC125257.1-201ENST00000560400 2930 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 NACA-203ENST00000454682 6629 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 CD44-206ENST00000415148 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 CCDC15-203ENST00000529051 3924 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF583-202ENST00000333201 4916 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF189-204ENST00000615466 2316 ntTSL 3 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 KCNJ15-207ENST00000398934 2815 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 PSENEN-201ENST00000222266 603 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 RNU6-661P-201ENST00000362409 107 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 Y_RNA.91-201ENST00000363042 107 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 RNA5SP349-201ENST00000363743 109 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 SNORA25.5-201ENST00000363782 126 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 RN7SKP227-201ENST00000364445 330 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 Y_RNA.324-201ENST00000365165 102 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 SNORA7.3-201ENST00000384186 139 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 SNORA8.1-201ENST00000384250 140 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 RNU6-1067P-201ENST00000384752 107 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 MIR520G-201ENST00000385064 90 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 MIR520H-201ENST00000385126 88 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 TRBV6-4-201ENST00000390360 365 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 RNA5SP496-201ENST00000391240 109 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms