RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 AEBP2Q6ZN18 517 aaPredicted RBP9.42□□□□□ -0.9
TRAJ53-201ENST00000390485 CHIC1Q5VXU3 224 aa8.76□□□□□ -1.01
TRAJ53-201ENST00000390485 POTEDQ86YR6 584 aa8.41□□□□□ -1.06
TRAJ53-201ENST00000390485 SENP3Q9H4L4 574 aaPredicted RBP8.13□□□□□ -1.11
TRAJ53-201ENST00000390485 PHF23Q9BUL5 403 aaPredicted RBP7.92□□□□□ -1.14
TRAJ53-201ENST00000390485 FOXD1Q16676 465 aa7.66□□□□□ -1.18
TRAJ53-201ENST00000390485 MSH5O43196 834 aa7.43□□□□□ -1.22
TRAJ53-201ENST00000390485 PIAS4Q8N2W9 510 aaPredicted RBP6.95□□□□□ -1.3
TRAJ53-201ENST00000390485 CACNB1Q02641 598 aaPredicted RBP6.76□□□□□ -1.33
TRAJ53-201ENST00000390485 PPP6R1Q9UPN7 881 aa6.65□□□□□ -1.34
TRAJ53-201ENST00000390485 ADRA2BP18089 450 aa6.55□□□□□ -1.36
TRAJ53-201ENST00000390485 POTEHQ6S545 545 aa6.45□□□□□ -1.38
TRAJ53-201ENST00000390485 DMRT2Q9Y5R5 561 aa6.35□□□□□ -1.39
TRAJ53-201ENST00000390485 RNF39Q9H2S5 420 aa6.3□□□□□ -1.4
TRAJ53-201ENST00000390485 PLPPR3Q6T4P5 718 aa6.29□□□□□ -1.4
TRAJ53-201ENST00000390485 MAPK8IP2Q13387 824 aaPredicted RBP6.23□□□□□ -1.41
TRAJ53-201ENST00000390485 C1QBPQ07021 282 aaKnown RBP6.16□□□□□ -1.42
TRAJ53-201ENST00000390485 DCAF8L1A6NGE4 600 aa6.02□□□□□ -1.45
TRAJ53-201ENST00000390485 SCAF1Q9H7N4 1312 aaKnown RBP6□□□□□ -1.45
TRAJ53-201ENST00000390485 HOXD11P31277 338 aaPredicted RBP5.87□□□□□ -1.47
TRAJ53-201ENST00000390485 DNAJC5BQ9UF47 199 aa5.85□□□□□ -1.47
TRAJ53-201ENST00000390485 SP7Q8TDD2 431 aaPredicted RBP5.73□□□□□ -1.49
TRAJ53-201ENST00000390485 DSG3P32926 999 aa5.65□□□□□ -1.5
TRAJ53-201ENST00000390485 RNF216Q9NWF9 866 aaPredicted RBP5.62□□□□□ -1.51
TRAJ53-201ENST00000390485 CHRDL2Q6WN34 429 aa5.55□□□□□ -1.52
TRAJ53-201ENST00000390485 PLSCR2Q9NRY7 297 aa5.54□□□□□ -1.52
TRAJ53-201ENST00000390485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.52□□□□□ -1.53
TRAJ53-201ENST00000390485 CNKSR2Q8WXI2 1034 aa5.48□□□□□ -1.53
TRAJ53-201ENST00000390485 SPINK5Q9NQ38 1064 aaPredicted RBP5.47□□□□□ -1.53
TRAJ53-201ENST00000390485 CAPN15O75808 1086 aa5.46□□□□□ -1.54
TRAJ53-201ENST00000390485 PPP4R3CPQ6ZMV5 832 aa5.41□□□□□ -1.54
TRAJ53-201ENST00000390485 RBM42Q9BTD8 480 aaKnown RBP5.4□□□□□ -1.54
TRAJ53-201ENST00000390485 U3KPZ7 1027 aaPredicted RBP5.36□□□□□ -1.55
TRAJ53-201ENST00000390485 LHX8Q68G74 356 aa5.35□□□□□ -1.55
TRAJ53-201ENST00000390485 HAX1O00165 279 aa5.33□□□□□ -1.56
TRAJ53-201ENST00000390485 ABCB7O75027 752 aa5.27□□□□□ -1.57
TRAJ53-201ENST00000390485 PIP4P2Q8N4L2 257 aa5.27□□□□□ -1.57
TRAJ53-201ENST00000390485 EVX2Q03828 476 aa5.25□□□□□ -1.57
TRAJ53-201ENST00000390485 ZNF219Q9P2Y4 722 aaPredicted RBP5.22□□□□□ -1.57
TRAJ53-201ENST00000390485 TRHP20396 242 aaPredicted RBP5.21□□□□□ -1.58
TRAJ53-201ENST00000390485 FXR2P51116 673 aaKnown RBP eCLIP5.15□□□□□ -1.59
TRAJ53-201ENST00000390485 AKT1S1Q96B36 256 aa5.14□□□□□ -1.59
TRAJ53-201ENST00000390485 APLP2Q06481 763 aa5.12□□□□□ -1.59
TRAJ53-201ENST00000390485 GABBR2O75899 941 aa5.09□□□□□ -1.59
TRAJ53-201ENST00000390485 REM2Q8IYK8 340 aaPredicted RBP5.09□□□□□ -1.59
TRAJ53-201ENST00000390485 POTEMA6NI47 508 aa5.07□□□□□ -1.6
TRAJ53-201ENST00000390485 PCDH10Q9P2E7 1040 aa5.07□□□□□ -1.6
TRAJ53-201ENST00000390485 PITPNM1O00562 1244 aa5.03□□□□□ -1.6
TRAJ53-201ENST00000390485 POTEGQ6S5H5 508 aa5.03□□□□□ -1.6
TRAJ53-201ENST00000390485 C19orf67A6NJJ6 358 aa5.01□□□□□ -1.61
TRAJ53-201ENST00000390485 POTEIP0CG38 1075 aa5□□□□□ -1.61
TRAJ53-201ENST00000390485 NCBP3Q53F19 620 aaKnown RBP4.99□□□□□ -1.61
TRAJ53-201ENST00000390485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.97□□□□□ -1.61
TRAJ53-201ENST00000390485 HNRNPUL2Q1KMD3 747 aaKnown RBP4.97□□□□□ -1.61
TRAJ53-201ENST00000390485 POLA2Q14181 598 aa4.94□□□□□ -1.62
TRAJ53-201ENST00000390485 NPM3O75607 178 aaKnown RBP4.93□□□□□ -1.62
TRAJ53-201ENST00000390485 OTUD5Q96G74 571 aa4.93□□□□□ -1.62
TRAJ53-201ENST00000390485 SLC4A2P04920 1241 aa4.91□□□□□ -1.62
TRAJ53-201ENST00000390485 SAMD1Q6SPF0 538 aaPredicted RBP4.91□□□□□ -1.62
TRAJ53-201ENST00000390485 PRKAR2AP13861 404 aaKnown RBP4.87□□□□□ -1.63
TRAJ53-201ENST00000390485 POTEB2H3BUK9 544 aa4.81□□□□□ -1.64
TRAJ53-201ENST00000390485 CLCN6P51797 869 aa4.81□□□□□ -1.64
TRAJ53-201ENST00000390485 LCE2DQ5TA82 110 aaPredicted RBP4.8□□□□□ -1.64
TRAJ53-201ENST00000390485 OSCARQ8IYS5 282 aa4.8□□□□□ -1.64
TRAJ53-201ENST00000390485 ZBTB12Q9Y330 459 aaPredicted RBP4.8□□□□□ -1.64
TRAJ53-201ENST00000390485 DCBLD2Q96PD2 775 aa4.77□□□□□ -1.65
TRAJ53-201ENST00000390485 CDAN1Q8IWY9 1227 aa4.68□□□□□ -1.66
TRAJ53-201ENST00000390485 SPDYE1Q8NFV5 336 aaPredicted RBP4.68□□□□□ -1.66
TRAJ53-201ENST00000390485 CD44P16070 742 aaKnown RBP4.67□□□□□ -1.66
TRAJ53-201ENST00000390485 FAM163AQ96GL9 167 aaPredicted RBP4.67□□□□□ -1.66
TRAJ53-201ENST00000390485 MMRN1Q13201 1228 aa4.66□□□□□ -1.66
TRAJ53-201ENST00000390485 CHADLQ6NUI6 762 aa4.66□□□□□ -1.66
TRAJ53-201ENST00000390485 CLEC11AQ9Y240 323 aa4.65□□□□□ -1.67
TRAJ53-201ENST00000390485 POTEJP0CG39 1038 aa4.64□□□□□ -1.67
TRAJ53-201ENST00000390485 MAMSTRQ6ZN01 415 aa4.62□□□□□ -1.67
TRAJ53-201ENST00000390485 SPDYE2BA6NHP3 402 aa4.61□□□□□ -1.67
TRAJ53-201ENST00000390485 SPDYE6P0CI01 402 aa4.61□□□□□ -1.67
TRAJ53-201ENST00000390485 SPDYE2Q495Y8 402 aa4.61□□□□□ -1.67
TRAJ53-201ENST00000390485 ZNF579Q8NAF0 562 aaKnown RBP4.61□□□□□ -1.67
TRAJ53-201ENST00000390485 SPNS2Q8IVW8 549 aa4.6□□□□□ -1.67
TRAJ53-201ENST00000390485 GALR2O43603 387 aaPredicted RBP4.58□□□□□ -1.68
TRAJ53-201ENST00000390485 MYCNP04198 464 aaPredicted RBP4.57□□□□□ -1.68
TRAJ53-201ENST00000390485 PELP1Q8IZL8 1130 aaKnown RBP4.57□□□□□ -1.68
TRAJ53-201ENST00000390485 FARP1Q9Y4F1 1045 aaPredicted RBP4.55□□□□□ -1.68
TRAJ53-201ENST00000390485 SCUBE2Q9NQ36 999 aa4.52□□□□□ -1.69
TRAJ53-201ENST00000390485 METRNQ9UJH8 293 aa4.52□□□□□ -1.69
TRAJ53-201ENST00000390485 ATF5Q9Y2D1 282 aaPredicted RBP4.52□□□□□ -1.69
TRAJ53-201ENST00000390485 PRR29P0C7W0 189 aa4.51□□□□□ -1.69
TRAJ53-201ENST00000390485 C7P10643 843 aa4.51□□□□□ -1.69
TRAJ53-201ENST00000390485 ZRANB1Q9UGI0 708 aa4.5□□□□□ -1.69
TRAJ53-201ENST00000390485 SLC39A7Q92504 469 aa4.49□□□□□ -1.69
TRAJ53-201ENST00000390485 SSUH2Q9Y2M2 353 aa4.49□□□□□ -1.69
TRAJ53-201ENST00000390485 ASTLQ6HA08 431 aaPredicted RBP4.47□□□□□ -1.69
TRAJ53-201ENST00000390485 ST18O60284 1047 aa4.43□□□□□ -1.7
TRAJ53-201ENST00000390485 ATMINO43313 823 aaPredicted RBP4.42□□□□□ -1.7
TRAJ53-201ENST00000390485 ZNF692Q9BU19 519 aaPredicted RBP4.41□□□□□ -1.7
TRAJ53-201ENST00000390485 POTEFA5A3E0 1075 aa4.39□□□□□ -1.71
TRAJ53-201ENST00000390485 PHF12Q96QT6 1004 aa4.38□□□□□ -1.71
TRAJ53-201ENST00000390485 FBLN2P98095 1184 aa4.36□□□□□ -1.71
TRAJ53-201ENST00000390485 TMEM121BQ9BXQ6 578 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms