RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 AEBP2Q6ZN18 517 aaPredicted RBP11.04□□□□□ -0.64
GTDC1-206ENST00000409214 CHIC1Q5VXU3 224 aa10.41□□□□□ -0.74
GTDC1-206ENST00000409214 SLC24A1O60721 1099 aa9.75□□□□□ -0.85
GTDC1-206ENST00000409214 EHMT2Q96KQ7 1210 aa9.62□□□□□ -0.87
GTDC1-206ENST00000409214 SENP3Q9H4L4 574 aaPredicted RBP9.56□□□□□ -0.88
GTDC1-206ENST00000409214 PHF23Q9BUL5 403 aaPredicted RBP9.43□□□□□ -0.9
GTDC1-206ENST00000409214 PLPPR3Q6T4P5 718 aa9.31□□□□□ -0.92
GTDC1-206ENST00000409214 RTN4Q9NQC3 1192 aaKnown RBP9.11□□□□□ -0.95
GTDC1-206ENST00000409214 CSRNP3Q8WYN3 585 aa8.97□□□□□ -0.97
GTDC1-206ENST00000409214 KCNA4P22459 653 aa8.97□□□□□ -0.97
GTDC1-206ENST00000409214 FOXD1Q16676 465 aa8.89□□□□□ -0.99
GTDC1-206ENST00000409214 POTEDQ86YR6 584 aa8.78□□□□□ -1
GTDC1-206ENST00000409214 AMER1Q5JTC6 1135 aaPredicted RBP8.7□□□□□ -1.02
GTDC1-206ENST00000409214 PRKCSHP14314 528 aaPredicted RBP8.68□□□□□ -1.02
GTDC1-206ENST00000409214 NCBP3Q53F19 620 aaKnown RBP8.64□□□□□ -1.03
GTDC1-206ENST00000409214 DAXXQ9UER7 740 aaPredicted RBP8.53□□□□□ -1.04
GTDC1-206ENST00000409214 ADRA2BP18089 450 aa8.53□□□□□ -1.04
GTDC1-206ENST00000409214 SLC4A1APQ9BWU0 796 aaKnown RBP8.52□□□□□ -1.05
GTDC1-206ENST00000409214 MSH5O43196 834 aa8.51□□□□□ -1.05
GTDC1-206ENST00000409214 ZBTB22O15209 634 aa8.39□□□□□ -1.07
GTDC1-206ENST00000409214 TIMELESSQ9UNS1 1208 aa8.36□□□□□ -1.07
GTDC1-206ENST00000409214 TAOK2Q9UL54 1235 aa8.28□□□□□ -1.08
GTDC1-206ENST00000409214 PIAS4Q8N2W9 510 aaPredicted RBP8.25□□□□□ -1.09
GTDC1-206ENST00000409214 TULP1O00294 542 aaPredicted RBP8.22□□□□□ -1.09
GTDC1-206ENST00000409214 PPP6R1Q9UPN7 881 aa8.19□□□□□ -1.1
GTDC1-206ENST00000409214 TPRNQ4KMQ1 711 aa8.18□□□□□ -1.1
GTDC1-206ENST00000409214 ARXQ96QS3 562 aa8.12□□□□□ -1.11
GTDC1-206ENST00000409214 PLCB2Q00722 1185 aa8.11□□□□□ -1.11
GTDC1-206ENST00000409214 BCANQ96GW7 911 aa8.09□□□□□ -1.11
GTDC1-206ENST00000409214 NPM3O75607 178 aaKnown RBP8.06□□□□□ -1.12
GTDC1-206ENST00000409214 HAP1P54257 671 aaPredicted RBP8.05□□□□□ -1.12
GTDC1-206ENST00000409214 FKBP8Q14318 412 aa8.01□□□□□ -1.13
GTDC1-206ENST00000409214 GTF3C3Q9Y5Q9 886 aa7.91□□□□□ -1.14
GTDC1-206ENST00000409214 HOMEZQ8IX15 550 aa7.9□□□□□ -1.14
GTDC1-206ENST00000409214 KLHL34Q8N239 644 aa7.89□□□□□ -1.15
GTDC1-206ENST00000409214 PPP4R3CPQ6ZMV5 832 aa7.89□□□□□ -1.15
GTDC1-206ENST00000409214 KDM2AQ9Y2K7 1162 aa7.89□□□□□ -1.15
GTDC1-206ENST00000409214 FBLN2P98095 1184 aa7.86□□□□□ -1.15
GTDC1-206ENST00000409214 PODXL2Q9NZ53 605 aa7.85□□□□□ -1.15
GTDC1-206ENST00000409214 APLP2Q06481 763 aa7.81□□□□□ -1.16
GTDC1-206ENST00000409214 RANGAP1P46060 587 aaPredicted RBP7.76□□□□□ -1.17
GTDC1-206ENST00000409214 TMEM132AQ24JP5 1023 aa7.75□□□□□ -1.17
GTDC1-206ENST00000409214 VSIG10Q8N0Z9 540 aa7.74□□□□□ -1.17
GTDC1-206ENST00000409214 FOXD4L1Q9NU39 408 aa7.73□□□□□ -1.17
GTDC1-206ENST00000409214 DCAF8L2P0C7V8 631 aa7.71□□□□□ -1.17
GTDC1-206ENST00000409214 SUPT5HO00267 1087 aaKnown RBP7.67□□□□□ -1.18
GTDC1-206ENST00000409214 C14orf37Q86TY3 774 aa7.66□□□□□ -1.18
GTDC1-206ENST00000409214 TRIM26Q12899 539 aaPredicted RBP7.62□□□□□ -1.19
GTDC1-206ENST00000409214 NPM2Q86SE8 214 aaKnown RBP7.6□□□□□ -1.19
GTDC1-206ENST00000409214 UBTFP17480 764 aaKnown RBP7.59□□□□□ -1.19
GTDC1-206ENST00000409214 HRCP23327 699 aa7.54□□□□□ -1.2
GTDC1-206ENST00000409214 ERICH6Q7L0X2 663 aa7.52□□□□□ -1.21
GTDC1-206ENST00000409214 DMRT2Q9Y5R5 561 aa7.51□□□□□ -1.21
GTDC1-206ENST00000409214 PELP1Q8IZL8 1130 aaKnown RBP7.51□□□□□ -1.21
GTDC1-206ENST00000409214 TSHZ2Q9NRE2 1034 aa7.51□□□□□ -1.21
GTDC1-206ENST00000409214 PAXIP1Q6ZW49 1069 aaPredicted RBP7.5□□□□□ -1.21
GTDC1-206ENST00000409214 CFAP44Q96MT7 982 aa7.5□□□□□ -1.21
GTDC1-206ENST00000409214 NPM1P06748 294 aaKnown RBP eCLIP7.5□□□□□ -1.21
GTDC1-206ENST00000409214 CACNB1Q02641 598 aaPredicted RBP7.47□□□□□ -1.21
GTDC1-206ENST00000409214 PKD2Q13563 968 aa7.47□□□□□ -1.21
GTDC1-206ENST00000409214 LOC105371045A0A1W2PR82 267 aa7.43□□□□□ -1.22
GTDC1-206ENST00000409214 SCAF1Q9H7N4 1312 aaKnown RBP7.43□□□□□ -1.22
GTDC1-206ENST00000409214 MAPK8IP2Q13387 824 aaPredicted RBP7.43□□□□□ -1.22
GTDC1-206ENST00000409214 TRHP20396 242 aaPredicted RBP7.42□□□□□ -1.22
GTDC1-206ENST00000409214 TTBK1Q5TCY1 1321 aaPredicted RBP7.4□□□□□ -1.23
GTDC1-206ENST00000409214 EIF5BO60841 1220 aaKnown RBP7.37□□□□□ -1.23
GTDC1-206ENST00000409214 NBR1Q14596 966 aa7.37□□□□□ -1.23
GTDC1-206ENST00000409214 IFNLR1Q8IU57 520 aaPredicted RBP7.35□□□□□ -1.23
GTDC1-206ENST00000409214 CNKSR2Q8WXI2 1034 aa7.34□□□□□ -1.23
GTDC1-206ENST00000409214 FBXO3Q9UK99 471 aa7.32□□□□□ -1.24
GTDC1-206ENST00000409214 PLEKHG5O94827 1062 aa7.32□□□□□ -1.24
GTDC1-206ENST00000409214 SLC4A2P04920 1241 aa7.32□□□□□ -1.24
GTDC1-206ENST00000409214 BBXQ8WY36 941 aaPredicted RBP7.32□□□□□ -1.24
GTDC1-206ENST00000409214 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.32□□□□□ -1.24
GTDC1-206ENST00000409214 MYT1Q01538 1121 aa7.27□□□□□ -1.25
GTDC1-206ENST00000409214 ARID3AQ99856 593 aa7.25□□□□□ -1.25
GTDC1-206ENST00000409214 VASPP50552 380 aaPredicted RBP7.24□□□□□ -1.25
GTDC1-206ENST00000409214 ATF5Q9Y2D1 282 aaPredicted RBP7.23□□□□□ -1.25
GTDC1-206ENST00000409214 SPRYD3Q8NCJ5 442 aa7.22□□□□□ -1.25
GTDC1-206ENST00000409214 DNAJC5Q9H3Z4 198 aa7.21□□□□□ -1.25
GTDC1-206ENST00000409214 IGSF3O75054 1194 aa7.21□□□□□ -1.26
GTDC1-206ENST00000409214 BRPF1P55201 1214 aaPredicted RBP7.21□□□□□ -1.26
GTDC1-206ENST00000409214 DCAF8L1A6NGE4 600 aa7.2□□□□□ -1.26
GTDC1-206ENST00000409214 RNF39Q9H2S5 420 aa7.19□□□□□ -1.26
GTDC1-206ENST00000409214 NISCHQ9Y2I1 1504 aa7.18□□□□□ -1.26
GTDC1-206ENST00000409214 RGL2O15211 777 aa7.17□□□□□ -1.26
GTDC1-206ENST00000409214 C1orf115Q9H7X2 142 aa7.17□□□□□ -1.26
GTDC1-206ENST00000409214 ATXN8OSP0DMR3 200 aa7.17□□□□□ -1.26
GTDC1-206ENST00000409214 NECTIN2Q92692 538 aa7.17□□□□□ -1.26
GTDC1-206ENST00000409214 DNAJC5BQ9UF47 199 aa7.16□□□□□ -1.26
GTDC1-206ENST00000409214 ECM2O94769 699 aaPredicted RBP7.12□□□□□ -1.27
GTDC1-206ENST00000409214 HOXD11P31277 338 aaPredicted RBP7.11□□□□□ -1.27
GTDC1-206ENST00000409214 C1QBPQ07021 282 aaKnown RBP7.11□□□□□ -1.27
GTDC1-206ENST00000409214 MYCNP04198 464 aaPredicted RBP7.09□□□□□ -1.27
GTDC1-206ENST00000409214 ARID3CA6NKF2 412 aa7.08□□□□□ -1.28
GTDC1-206ENST00000409214 CHGAP10645 457 aaKnown RBP7.06□□□□□ -1.28
GTDC1-206ENST00000409214 ZNF428Q96B54 188 aa7.06□□□□□ -1.28
GTDC1-206ENST00000409214 CHMP4AQ9BY43 222 aa7.04□□□□□ -1.28
GTDC1-206ENST00000409214 CCDC9Q9Y3X0 531 aaKnown RBP7.04□□□□□ -1.28
GTDC1-206ENST00000409214 NEUROD2Q15784 382 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms