RNA–Protein interactions for RNA: ENST00000198767.10

RRN3-201, Transcript of RRN3 homolog, RNA polymerase I transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRN3, Length 3,762 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3-201ENST00000198767 NISCHQ9Y2I1 1504 aa17.53■□□□□ 0.4
RRN3-201ENST00000198767 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
RRN3-201ENST00000198767 SHROOM4Q9ULL8 1493 aa15.66■□□□□ 0.1
RRN3-201ENST00000198767 SUPT5HO00267 1087 aaKnown RBP15.34■□□□□ 0.05
RRN3-201ENST00000198767 ABCC9O60706 1549 aa14.76□□□□□ -0.05
RRN3-201ENST00000198767 PPARGC1BQ86YN6 1023 aaKnown RBP14.75□□□□□ -0.05
RRN3-201ENST00000198767 PCGF6Q9BYE7 350 aa14.71□□□□□ -0.06
RRN3-201ENST00000198767 ZCCHC6Q5VYS8 1495 aaKnown RBP14.64□□□□□ -0.07
RRN3-201ENST00000198767 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
RRN3-201ENST00000198767 HRCP23327 699 aa14.62□□□□□ -0.07
RRN3-201ENST00000198767 EHMT2Q96KQ7 1210 aa14.52□□□□□ -0.08
RRN3-201ENST00000198767 MYO15BQ96JP2 1530 aa14.44□□□□□ -0.1
RRN3-201ENST00000198767 CHIC1Q5VXU3 224 aa14.4□□□□□ -0.1
RRN3-201ENST00000198767 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
RRN3-201ENST00000198767 LOC105371045A0A1W2PR82 267 aa14.36□□□□□ -0.11
RRN3-201ENST00000198767 FAM9AQ8IZU1 332 aaPredicted RBP14.34□□□□□ -0.11
RRN3-201ENST00000198767 SCRIBQ14160 1630 aa14.29□□□□□ -0.12
RRN3-201ENST00000198767 TRIM41Q8WV44 630 aa14.13□□□□□ -0.15
RRN3-201ENST00000198767 DCAF1Q9Y4B6 1507 aa14.01□□□□□ -0.17
RRN3-201ENST00000198767 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
RRN3-201ENST00000198767 SCAF1Q9H7N4 1312 aaKnown RBP13.93□□□□□ -0.18
RRN3-201ENST00000198767 TRIM26Q12899 539 aaPredicted RBP13.92□□□□□ -0.18
RRN3-201ENST00000198767 RSF1Q96T23 1441 aaPredicted RBP13.91□□□□□ -0.18
RRN3-201ENST00000198767 TTBK1Q5TCY1 1321 aaPredicted RBP13.91□□□□□ -0.18
RRN3-201ENST00000198767 NACADO15069 1562 aa13.89□□□□□ -0.19
RRN3-201ENST00000198767 RANGAP1P46060 587 aaPredicted RBP13.87□□□□□ -0.19
RRN3-201ENST00000198767 RB1CC1Q8TDY2 1594 aa13.86□□□□□ -0.19
RRN3-201ENST00000198767 MROH2BQ7Z745 1585 aa13.72□□□□□ -0.21
RRN3-201ENST00000198767 UBTFP17480 764 aaKnown RBP13.69□□□□□ -0.22
RRN3-201ENST00000198767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.69□□□□□ -0.22
RRN3-201ENST00000198767 PELP1Q8IZL8 1130 aaKnown RBP13.63□□□□□ -0.23
RRN3-201ENST00000198767 NEUROD1Q13562 356 aa13.62□□□□□ -0.23
RRN3-201ENST00000198767 ZEB1P37275 1124 aaPredicted RBP13.59□□□□□ -0.23
RRN3-201ENST00000198767 WIZO95785 1651 aa13.57□□□□□ -0.24
RRN3-201ENST00000198767 CCER1Q8TC90 406 aaPredicted RBP13.57□□□□□ -0.24
RRN3-201ENST00000198767 GTF3C3Q9Y5Q9 886 aa13.56□□□□□ -0.24
RRN3-201ENST00000198767 YTHDC1Q96MU7 727 aaKnown RBP13.55□□□□□ -0.24
RRN3-201ENST00000198767 BAZ1AQ9NRL2 1556 aaPredicted RBP13.51□□□□□ -0.25
RRN3-201ENST00000198767 ACIN1Q9UKV3 1341 aaKnown RBP13.5□□□□□ -0.25
RRN3-201ENST00000198767 DIEXFQ68CQ4 756 aaKnown RBP13.43□□□□□ -0.26
RRN3-201ENST00000198767 CCDC88BA6NC98 1476 aa13.41□□□□□ -0.26
RRN3-201ENST00000198767 APLP2Q06481 763 aa13.4□□□□□ -0.27
RRN3-201ENST00000198767 ATP1B4Q9UN42 357 aaPredicted RBP13.39□□□□□ -0.27
RRN3-201ENST00000198767 CSRNP3Q8WYN3 585 aa13.37□□□□□ -0.27
RRN3-201ENST00000198767 BAZ1BQ9UIG0 1483 aaKnown RBP13.37□□□□□ -0.27
RRN3-201ENST00000198767 ABCC8Q09428 1581 aa13.36□□□□□ -0.27
RRN3-201ENST00000198767 SMARCA4P51532 1647 aa13.34□□□□□ -0.27
RRN3-201ENST00000198767 CENPBP07199 599 aaPredicted RBP13.31□□□□□ -0.28
RRN3-201ENST00000198767 SOGA1O94964 1423 aa13.28□□□□□ -0.28
RRN3-201ENST00000198767 BICRAQ9NZM4 1560 aa13.27□□□□□ -0.28
RRN3-201ENST00000198767 ATAD2BQ9ULI0 1458 aa13.26□□□□□ -0.29
RRN3-201ENST00000198767 TOP2AP11388 1531 aaKnown RBP13.25□□□□□ -0.29
RRN3-201ENST00000198767 WRNQ14191 1432 aaPredicted RBP eCLIP13.24□□□□□ -0.29
RRN3-201ENST00000198767 HNRNPUL2Q1KMD3 747 aaKnown RBP13.22□□□□□ -0.29
RRN3-201ENST00000198767 UNC13AQ9UPW8 1703 aa13.22□□□□□ -0.29
RRN3-201ENST00000198767 P3H3Q8IVL6 736 aa13.19□□□□□ -0.3
RRN3-201ENST00000198767 ITGAEP38570 1179 aa13.19□□□□□ -0.3
RRN3-201ENST00000198767 RUSC2Q8N2Y8 1516 aa13.17□□□□□ -0.3
RRN3-201ENST00000198767 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
RRN3-201ENST00000198767 MIER1Q8N108 512 aa13.16□□□□□ -0.3
RRN3-201ENST00000198767 DNAJC5BQ9UF47 199 aa13.12□□□□□ -0.31
RRN3-201ENST00000198767 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
RRN3-201ENST00000198767 EIF4G1Q04637 1599 aaKnown RBP13.07□□□□□ -0.32
RRN3-201ENST00000198767 CEP162Q5TB80 1403 aa13.05□□□□□ -0.32
RRN3-201ENST00000198767 ARID3CA6NKF2 412 aa13.04□□□□□ -0.32
RRN3-201ENST00000198767 FBLN2P98095 1184 aa13.01□□□□□ -0.33
RRN3-201ENST00000198767 CLIP1P30622 1438 aa12.97□□□□□ -0.33
RRN3-201ENST00000198767 NCAPD3P42695 1498 aa12.96□□□□□ -0.33
RRN3-201ENST00000198767 GOLGA3Q08378 1498 aa12.95□□□□□ -0.34
RRN3-201ENST00000198767 TNIKQ9UKE5 1360 aa12.94□□□□□ -0.34
RRN3-201ENST00000198767 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
RRN3-201ENST00000198767 BCANQ96GW7 911 aa12.94□□□□□ -0.34
RRN3-201ENST00000198767 MYT1Q01538 1121 aa12.92□□□□□ -0.34
RRN3-201ENST00000198767 EEA1Q15075 1411 aa12.91□□□□□ -0.34
RRN3-201ENST00000198767 CUX2O14529 1486 aa12.91□□□□□ -0.34
RRN3-201ENST00000198767 FAM50AQ14320 339 aaKnown RBP12.9□□□□□ -0.34
RRN3-201ENST00000198767 KIF27Q86VH2 1401 aa12.9□□□□□ -0.34
RRN3-201ENST00000198767 SYNJ1O43426 1573 aa12.89□□□□□ -0.35
RRN3-201ENST00000198767 RAPGEF2Q9Y4G8 1499 aa12.89□□□□□ -0.35
RRN3-201ENST00000198767 NESP48681 1621 aa12.89□□□□□ -0.35
RRN3-201ENST00000198767 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
RRN3-201ENST00000198767 TDRD9Q8NDG6 1382 aaKnown RBP12.87□□□□□ -0.35
RRN3-201ENST00000198767 CC2D2AQ9P2K1 1620 aa12.87□□□□□ -0.35
RRN3-201ENST00000198767 KCNH8Q96L42 1107 aa12.82□□□□□ -0.36
RRN3-201ENST00000198767 SUPT16HQ9Y5B9 1047 aaKnown RBP12.81□□□□□ -0.36
RRN3-201ENST00000198767 CARMIL1Q5VZK9 1371 aa12.81□□□□□ -0.36
RRN3-201ENST00000198767 KANK4Q5T7N3 995 aaPredicted RBP12.8□□□□□ -0.36
RRN3-201ENST00000198767 FANCD2Q9BXW9 1451 aa12.8□□□□□ -0.36
RRN3-201ENST00000198767 PEG3Q9GZU2 1588 aa12.8□□□□□ -0.36
RRN3-201ENST00000198767 CFTRP13569 1480 aa12.79□□□□□ -0.36
RRN3-201ENST00000198767 RAD54L2Q9Y4B4 1467 aa12.78□□□□□ -0.36
RRN3-201ENST00000198767 CUX1P39880 1505 aa12.75□□□□□ -0.37
RRN3-201ENST00000198767 HMGXB3Q12766 1538 aa12.75□□□□□ -0.37
RRN3-201ENST00000198767 FGD5Q6ZNL6 1462 aa12.74□□□□□ -0.37
RRN3-201ENST00000198767 TSHZ2Q9NRE2 1034 aa12.73□□□□□ -0.37
RRN3-201ENST00000198767 IGF1RP08069 1367 aa12.72□□□□□ -0.37
RRN3-201ENST00000198767 HIRIP3Q9BW71 556 aaPredicted RBP12.7□□□□□ -0.38
RRN3-201ENST00000198767 PDS5BQ9NTI5 1447 aa12.7□□□□□ -0.38
RRN3-201ENST00000198767 ERCC6Q03468 1493 aa12.69□□□□□ -0.38
RRN3-201ENST00000198767 CHMP7Q8WUX9 453 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms