RNA–Protein interactions for RNA: ENST00000362409.1

RNU6-661P-201, Transcript of RNA, U6 small nuclear 661, pseudogene, humanhuman

BASIC

Gene RNU6-661P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-661P-201ENST00000362409 AEBP2Q6ZN18 517 aaPredicted RBP11.19□□□□□ -0.62
RNU6-661P-201ENST00000362409 CHIC1Q5VXU3 224 aa10.35□□□□□ -0.75
RNU6-661P-201ENST00000362409 SENP3Q9H4L4 574 aaPredicted RBP9.48□□□□□ -0.89
RNU6-661P-201ENST00000362409 PHF23Q9BUL5 403 aaPredicted RBP9.37□□□□□ -0.91
RNU6-661P-201ENST00000362409 FOXD1Q16676 465 aa8.94□□□□□ -0.98
RNU6-661P-201ENST00000362409 POTEDQ86YR6 584 aa8.66□□□□□ -1.02
RNU6-661P-201ENST00000362409 MSH5O43196 834 aa8.37□□□□□ -1.07
RNU6-661P-201ENST00000362409 PIAS4Q8N2W9 510 aaPredicted RBP8.28□□□□□ -1.08
RNU6-661P-201ENST00000362409 PPP6R1Q9UPN7 881 aa8.2□□□□□ -1.1
RNU6-661P-201ENST00000362409 ADRA2BP18089 450 aa8.16□□□□□ -1.1
RNU6-661P-201ENST00000362409 PLPPR3Q6T4P5 718 aa8.11□□□□□ -1.11
RNU6-661P-201ENST00000362409 MAPK8IP2Q13387 824 aaPredicted RBP7.58□□□□□ -1.2
RNU6-661P-201ENST00000362409 DMRT2Q9Y5R5 561 aa7.5□□□□□ -1.21
RNU6-661P-201ENST00000362409 CACNB1Q02641 598 aaPredicted RBP7.37□□□□□ -1.23
RNU6-661P-201ENST00000362409 SCAF1Q9H7N4 1312 aaKnown RBP7.34□□□□□ -1.23
RNU6-661P-201ENST00000362409 DCAF8L1A6NGE4 600 aa7.25□□□□□ -1.25
RNU6-661P-201ENST00000362409 RNF39Q9H2S5 420 aa7.17□□□□□ -1.26
RNU6-661P-201ENST00000362409 HOXD11P31277 338 aaPredicted RBP7.13□□□□□ -1.27
RNU6-661P-201ENST00000362409 PPP4R3CPQ6ZMV5 832 aa7.12□□□□□ -1.27
RNU6-661P-201ENST00000362409 CNKSR2Q8WXI2 1034 aa7□□□□□ -1.29
RNU6-661P-201ENST00000362409 RNF216Q9NWF9 866 aaPredicted RBP7□□□□□ -1.29
RNU6-661P-201ENST00000362409 C1QBPQ07021 282 aaKnown RBP6.99□□□□□ -1.29
RNU6-661P-201ENST00000362409 DNAJC5BQ9UF47 199 aa6.84□□□□□ -1.31
RNU6-661P-201ENST00000362409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.79□□□□□ -1.32
RNU6-661P-201ENST00000362409 POTEHQ6S545 545 aa6.72□□□□□ -1.33
RNU6-661P-201ENST00000362409 NCBP3Q53F19 620 aaKnown RBP6.7□□□□□ -1.34
RNU6-661P-201ENST00000362409 NPM3O75607 178 aaKnown RBP6.69□□□□□ -1.34
RNU6-661P-201ENST00000362409 SPINK5Q9NQ38 1064 aaPredicted RBP6.67□□□□□ -1.34
RNU6-661P-201ENST00000362409 U3KPZ7 1027 aaPredicted RBP6.67□□□□□ -1.34
RNU6-661P-201ENST00000362409 DSG3P32926 999 aa6.64□□□□□ -1.35
RNU6-661P-201ENST00000362409 CAPN15O75808 1086 aa6.63□□□□□ -1.35
RNU6-661P-201ENST00000362409 ABCB7O75027 752 aa6.5□□□□□ -1.37
RNU6-661P-201ENST00000362409 TRHP20396 242 aaPredicted RBP6.48□□□□□ -1.37
RNU6-661P-201ENST00000362409 SLC4A2P04920 1241 aa6.47□□□□□ -1.37
RNU6-661P-201ENST00000362409 ZNF219Q9P2Y4 722 aaPredicted RBP6.39□□□□□ -1.39
RNU6-661P-201ENST00000362409 KCNA4P22459 653 aa6.38□□□□□ -1.39
RNU6-661P-201ENST00000362409 APLP2Q06481 763 aa6.32□□□□□ -1.4
RNU6-661P-201ENST00000362409 CHRDL2Q6WN34 429 aa6.29□□□□□ -1.4
RNU6-661P-201ENST00000362409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.27□□□□□ -1.41
RNU6-661P-201ENST00000362409 HNRNPUL2Q1KMD3 747 aaKnown RBP6.27□□□□□ -1.41
RNU6-661P-201ENST00000362409 RBM42Q9BTD8 480 aaKnown RBP6.27□□□□□ -1.41
RNU6-661P-201ENST00000362409 SAMD1Q6SPF0 538 aaPredicted RBP6.26□□□□□ -1.41
RNU6-661P-201ENST00000362409 POLA2Q14181 598 aa6.24□□□□□ -1.41
RNU6-661P-201ENST00000362409 SP7Q8TDD2 431 aaPredicted RBP6.18□□□□□ -1.42
RNU6-661P-201ENST00000362409 MYCNP04198 464 aaPredicted RBP6.15□□□□□ -1.42
RNU6-661P-201ENST00000362409 ATF5Q9Y2D1 282 aaPredicted RBP6.12□□□□□ -1.43
RNU6-661P-201ENST00000362409 PIP4P2Q8N4L2 257 aa6.11□□□□□ -1.43
RNU6-661P-201ENST00000362409 AKT1S1Q96B36 256 aa6.1□□□□□ -1.43
RNU6-661P-201ENST00000362409 REM2Q8IYK8 340 aaPredicted RBP6.08□□□□□ -1.44
RNU6-661P-201ENST00000362409 OSCARQ8IYS5 282 aa6.07□□□□□ -1.44
RNU6-661P-201ENST00000362409 PITPNM1O00562 1244 aa6.05□□□□□ -1.44
RNU6-661P-201ENST00000362409 HAX1O00165 279 aa6.04□□□□□ -1.44
RNU6-661P-201ENST00000362409 EVX2Q03828 476 aa6.02□□□□□ -1.45
RNU6-661P-201ENST00000362409 FXR2P51116 673 aaKnown RBP eCLIP6□□□□□ -1.45
RNU6-661P-201ENST00000362409 ZBTB12Q9Y330 459 aaPredicted RBP6□□□□□ -1.45
RNU6-661P-201ENST00000362409 FOXD4L1Q9NU39 408 aa5.96□□□□□ -1.46
RNU6-661P-201ENST00000362409 SLC4A1APQ9BWU0 796 aaKnown RBP5.93□□□□□ -1.46
RNU6-661P-201ENST00000362409 ZBTB22O15209 634 aa5.89□□□□□ -1.47
RNU6-661P-201ENST00000362409 PRKAR2AP13861 404 aaKnown RBP5.87□□□□□ -1.47
RNU6-661P-201ENST00000362409 CLEC11AQ9Y240 323 aa5.85□□□□□ -1.47
RNU6-661P-201ENST00000362409 SPDYE2BA6NHP3 402 aa5.83□□□□□ -1.48
RNU6-661P-201ENST00000362409 C19orf67A6NJJ6 358 aa5.83□□□□□ -1.48
RNU6-661P-201ENST00000362409 SPDYE6P0CI01 402 aa5.83□□□□□ -1.48
RNU6-661P-201ENST00000362409 SPDYE2Q495Y8 402 aa5.83□□□□□ -1.48
RNU6-661P-201ENST00000362409 GABBR2O75899 941 aa5.82□□□□□ -1.48
RNU6-661P-201ENST00000362409 MKRN4PQ13434 485 aaPredicted RBP5.81□□□□□ -1.48
RNU6-661P-201ENST00000362409 CHADLQ6NUI6 762 aa5.8□□□□□ -1.48
RNU6-661P-201ENST00000362409 LHX8Q68G74 356 aa5.79□□□□□ -1.48
RNU6-661P-201ENST00000362409 SPDYE1Q8NFV5 336 aaPredicted RBP5.79□□□□□ -1.48
RNU6-661P-201ENST00000362409 FBLN2P98095 1184 aa5.78□□□□□ -1.48
RNU6-661P-201ENST00000362409 SSUH2Q9Y2M2 353 aa5.76□□□□□ -1.49
RNU6-661P-201ENST00000362409 ATXN8OSP0DMR3 200 aa5.75□□□□□ -1.49
RNU6-661P-201ENST00000362409 ZNF692Q9BU19 519 aaPredicted RBP5.75□□□□□ -1.49
RNU6-661P-201ENST00000362409 POTEIP0CG38 1075 aa5.73□□□□□ -1.49
RNU6-661P-201ENST00000362409 PRR29P0C7W0 189 aa5.68□□□□□ -1.5
RNU6-661P-201ENST00000362409 PABPN1Q86U42 306 aaKnown RBP eCLIP5.68□□□□□ -1.5
RNU6-661P-201ENST00000362409 CD44P16070 742 aaKnown RBP5.67□□□□□ -1.5
RNU6-661P-201ENST00000362409 PLSCR2Q9NRY7 297 aa5.66□□□□□ -1.5
RNU6-661P-201ENST00000362409 FARP1Q9Y4F1 1045 aaPredicted RBP5.63□□□□□ -1.51
RNU6-661P-201ENST00000362409 DCBLD2Q96PD2 775 aa5.57□□□□□ -1.52
RNU6-661P-201ENST00000362409 POTEB2H3BUK9 544 aa5.55□□□□□ -1.52
RNU6-661P-201ENST00000362409 GALR2O43603 387 aaPredicted RBP5.55□□□□□ -1.52
RNU6-661P-201ENST00000362409 ZNF579Q8NAF0 562 aaKnown RBP5.55□□□□□ -1.52
RNU6-661P-201ENST00000362409 ZRANB1Q9UGI0 708 aa5.55□□□□□ -1.52
RNU6-661P-201ENST00000362409 OTUD5Q96G74 571 aa5.54□□□□□ -1.52
RNU6-661P-201ENST00000362409 CREBZFQ9NS37 354 aa5.52□□□□□ -1.53
RNU6-661P-201ENST00000362409 CLCN6P51797 869 aa5.5□□□□□ -1.53
RNU6-661P-201ENST00000362409 PHF12Q96QT6 1004 aa5.5□□□□□ -1.53
RNU6-661P-201ENST00000362409 POTEMA6NI47 508 aa5.48□□□□□ -1.53
RNU6-661P-201ENST00000362409 PELP1Q8IZL8 1130 aaKnown RBP5.48□□□□□ -1.53
RNU6-661P-201ENST00000362409 POTEGQ6S5H5 508 aa5.46□□□□□ -1.54
RNU6-661P-201ENST00000362409 POTEJP0CG39 1038 aa5.43□□□□□ -1.54
RNU6-661P-201ENST00000362409 MNX1P50219 401 aaPredicted RBP5.4□□□□□ -1.54
RNU6-661P-201ENST00000362409 MS4A3Q96HJ5 214 aa5.4□□□□□ -1.54
RNU6-661P-201ENST00000362409 PAK3O75914 559 aaPredicted RBP5.39□□□□□ -1.55
RNU6-661P-201ENST00000362409 LCE2DQ5TA82 110 aaPredicted RBP5.39□□□□□ -1.55
RNU6-661P-201ENST00000362409 STAG3Q9UJ98 1225 aa5.39□□□□□ -1.55
RNU6-661P-201ENST00000362409 METRNQ9UJH8 293 aa5.39□□□□□ -1.55
RNU6-661P-201ENST00000362409 ATMINO43313 823 aaPredicted RBP5.37□□□□□ -1.55
RNU6-661P-201ENST00000362409 ASTLQ6HA08 431 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms