Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4S1Q9Y587 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 AL512353.2-201ENST00000448759 1962 ntBASIC18.27■□□□□ 0.52
AP4S1Q9Y587 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.27■□□□□ 0.52
AP4S1Q9Y587 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.27■□□□□ 0.51
AP4S1Q9Y587 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP4S1Q9Y587 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.27■□□□□ 0.51
AP4S1Q9Y587 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.27■□□□□ 0.51
AP4S1Q9Y587 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 EDA-201ENST00000338901 1233 ntBASIC18.26■□□□□ 0.51
AP4S1Q9Y587 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms