Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RCL1Q9Y2P8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 BICD1-207ENST00000551848 1962 ntBASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 AL354751.1-201ENST00000412768 1863 ntBASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 AC093525.10-201ENST00000625130 1569 ntBASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 AL136967.2-201ENST00000623968 743 ntBASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RCL1Q9Y2P8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 NOC2LP1-202ENST00000452600 2235 ntBASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 Z98044.1-201ENST00000632503 1764 ntBASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.79■□□□□ 0.12
RCL1Q9Y2P8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms