Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGC3Q9UN70 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 KSR1P1-201ENST00000446298 240 ntBASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 AP002982.1-201ENST00000492365 877 ntBASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGC3Q9UN70 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 Z85996.1-201ENST00000494644 937 ntBASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 AF186192.3-201ENST00000583427 947 ntBASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 BX323043.1-201ENST00000641006 1765 ntBASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGC3Q9UN70 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGC3Q9UN70 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGC3Q9UN70 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGC3Q9UN70 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGC3Q9UN70 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGC3Q9UN70 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.39■□□□□ 0.86
PCDHGC3Q9UN70 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGC3Q9UN70 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGC3Q9UN70 KRT8P41-201ENST00000533985 1514 ntBASIC20.39■□□□□ 0.85
PCDHGC3Q9UN70 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGC3Q9UN70 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
PCDHGC3Q9UN70 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGC3Q9UN70 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGC3Q9UN70 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGC3Q9UN70 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PCDHGC3Q9UN70 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGC3Q9UN70 AC004980.1-204ENST00000429707 299 ntBASIC20.39■□□□□ 0.85
PCDHGC3Q9UN70 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHGC3Q9UN70 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGC3Q9UN70 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PCDHGC3Q9UN70 UBE2SP1-201ENST00000450587 669 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms