Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 CROCCP5-201ENST00000436658 830 ntBASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGAP3Q9NP61 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ARFGAP3Q9NP61 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ARFGAP3Q9NP61 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ARFGAP3Q9NP61 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ARFGAP3Q9NP61 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ARFGAP3Q9NP61 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ARFGAP3Q9NP61 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ARFGAP3Q9NP61 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
ARFGAP3Q9NP61 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARFGAP3Q9NP61 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARFGAP3Q9NP61 KRT8P36-201ENST00000489121 1440 ntBASIC20.64■□□□□ 0.89
ARFGAP3Q9NP61 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARFGAP3Q9NP61 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
ARFGAP3Q9NP61 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARFGAP3Q9NP61 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
ARFGAP3Q9NP61 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.64■□□□□ 0.89
ARFGAP3Q9NP61 MIR663A-201ENST00000385250 93 ntBASIC20.64■□□□□ 0.89
ARFGAP3Q9NP61 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARFGAP3Q9NP61 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.64■□□□□ 0.89
ARFGAP3Q9NP61 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARFGAP3Q9NP61 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARFGAP3Q9NP61 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.64■□□□□ 0.89
ARFGAP3Q9NP61 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARFGAP3Q9NP61 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 AC007322.1-201ENST00000426983 750 ntBASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 AC068880.1-201ENST00000507289 2297 ntBASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGAP3Q9NP61 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 AC006333.2-201ENST00000607957 2099 ntBASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 AC245052.3-201ENST00000450182 901 ntBASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 BICD1-207ENST00000551848 1962 ntBASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 AL354751.1-201ENST00000412768 1863 ntBASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 AC116050.2-201ENST00000612102 1779 ntBASIC20.62■□□□□ 0.89
ARFGAP3Q9NP61 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGAP3Q9NP61 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARFGAP3Q9NP61 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
ARFGAP3Q9NP61 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
ARFGAP3Q9NP61 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms