Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLK4Q9HAZ1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.8■□□□□ 0.6
CLK4Q9HAZ1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 TSPY20P-201ENST00000450910 630 ntBASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLK4Q9HAZ1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 AC006058.3-201ENST00000606217 1069 ntBASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.78■□□□□ 0.6
CLK4Q9HAZ1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 ABHD17AP1-201ENST00000358206 933 ntBASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 AC128676.1-201ENST00000454392 318 ntBASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.77■□□□□ 0.6
CLK4Q9HAZ1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CLK4Q9HAZ1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLK4Q9HAZ1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CLK4Q9HAZ1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 KRT18P29-201ENST00000397031 1267 ntBASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 PRKY-204ENST00000533551 1019 ntBASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 AC069544.1-201ENST00000609399 999 ntBASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 AC116351.2-201ENST00000606540 1585 ntBASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLK4Q9HAZ1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms