Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 YBX1P10-201ENST00000444752 975 ntBASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 UNC93B4-201ENST00000505679 747 ntBASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 AL121829.2-201ENST00000620908 328 ntBASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC68Q9H2F9 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC68Q9H2F9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC68Q9H2F9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 RNA5SP413-201ENST00000516373 109 ntBASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 UNC93B5-201ENST00000530315 699 ntBASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 PRKY-204ENST00000533551 1019 ntBASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms