Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 AL133373.2-201ENST00000623187 2828 ntBASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
LCE3DQ9BYE3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 FAM21FP-204ENST00000608637 956 ntBASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 AC012183.1-201ENST00000625197 499 ntBASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 RARRES2P11-201ENST00000635158 484 ntBASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms