Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPGRIP1Q96KN7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPGRIP1Q96KN7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.3■■□□□ 1
RPGRIP1Q96KN7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 AC116050.2-201ENST00000612102 1779 ntBASIC21.29■■□□□ 1
RPGRIP1Q96KN7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.29■■□□□ 1
RPGRIP1Q96KN7 MIR6786-201ENST00000616843 113 ntBASIC21.29■■□□□ 1
RPGRIP1Q96KN7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.29■■□□□ 1
RPGRIP1Q96KN7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 AC005363.2-201ENST00000618631 242 ntBASIC21.28■■□□□ 1
RPGRIP1Q96KN7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPGRIP1Q96KN7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 Z82202.1-201ENST00000623446 1880 ntBASIC21.27■■□□□ 1
RPGRIP1Q96KN7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 TREX1-205ENST00000625293 1783 ntBASIC21.27■■□□□ 1
RPGRIP1Q96KN7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.27■■□□□ 1
RPGRIP1Q96KN7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
RPGRIP1Q96KN7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RPGRIP1Q96KN7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
RPGRIP1Q96KN7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RPGRIP1Q96KN7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
RPGRIP1Q96KN7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 AL691432.2-201ENST00000607222 2038 ntBASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.26■□□□□ 0.99
RPGRIP1Q96KN7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms