Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 MTDHP1-201ENST00000605323 784 ntBASIC19.78■□□□□ 0.76
SCG3Q8WXD2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 AC125437.2-201ENST00000625180 2167 ntBASIC19.78■□□□□ 0.76
SCG3Q8WXD2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.78■□□□□ 0.76
SCG3Q8WXD2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 AC239809.2-201ENST00000415381 517 ntBASIC19.77■□□□□ 0.76
SCG3Q8WXD2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SCG3Q8WXD2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
SCG3Q8WXD2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.77■□□□□ 0.75
SCG3Q8WXD2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 PRKY-204ENST00000533551 1019 ntBASIC19.76■□□□□ 0.75
SCG3Q8WXD2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 PHGDH-210ENST00000641115 1638 ntBASIC19.76■□□□□ 0.75
SCG3Q8WXD2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCG3Q8WXD2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCG3Q8WXD2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCG3Q8WXD2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCG3Q8WXD2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCG3Q8WXD2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.75■□□□□ 0.75
SCG3Q8WXD2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCG3Q8WXD2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCG3Q8WXD2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCG3Q8WXD2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SCG3Q8WXD2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCG3Q8WXD2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCG3Q8WXD2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCG3Q8WXD2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCG3Q8WXD2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SCG3Q8WXD2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCG3Q8WXD2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms