Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
MBD3L1Q8WWY6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MBD3L1Q8WWY6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
MBD3L1Q8WWY6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 IRX1P1-201ENST00000438849 1838 ntBASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 AC139713.2-201ENST00000641328 2723 ntBASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 DUX4L2-201ENST00000561772 1275 ntBASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 DUX4L6-201ENST00000626483 1275 ntBASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 DUX4L1-201ENST00000627662 1275 ntBASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 DUX4L8-201ENST00000629013 1275 ntBASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 DUX4L3-201ENST00000630187 1275 ntBASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 DUX4L7-201ENST00000630678 1275 ntBASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 DUX4L5-201ENST00000630834 1275 ntBASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MBD3L1Q8WWY6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 CCDC92B-201ENST00000575506 885 ntBASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.16■□□□□ 0.02
MBD3L1Q8WWY6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 KRT18P20-201ENST00000548986 1279 ntBASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MBD3L1Q8WWY6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms