Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC28.76■■■□□ 2.19
ARHGEF40Q8TER5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC28.76■■■□□ 2.19
ARHGEF40Q8TER5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ARHGEF40Q8TER5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ARHGEF40Q8TER5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
ARHGEF40Q8TER5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
ARHGEF40Q8TER5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
ARHGEF40Q8TER5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
ARHGEF40Q8TER5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
ARHGEF40Q8TER5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC28.75■■■□□ 2.19
ARHGEF40Q8TER5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
ARHGEF40Q8TER5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC28.75■■■□□ 2.19
ARHGEF40Q8TER5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
ARHGEF40Q8TER5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
ARHGEF40Q8TER5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC28.75■■■□□ 2.19
ARHGEF40Q8TER5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
ARHGEF40Q8TER5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
ARHGEF40Q8TER5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
ARHGEF40Q8TER5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC28.74■■■□□ 2.19
ARHGEF40Q8TER5 MIR574-201ENST00000385209 96 ntBASIC28.74■■■□□ 2.19
ARHGEF40Q8TER5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ARHGEF40Q8TER5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
ARHGEF40Q8TER5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
ARHGEF40Q8TER5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC28.74■■■□□ 2.19
ARHGEF40Q8TER5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
ARHGEF40Q8TER5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
ARHGEF40Q8TER5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC28.74■■■□□ 2.19
ARHGEF40Q8TER5 SEC1P-202ENST00000473944 940 ntBASIC28.74■■■□□ 2.19
ARHGEF40Q8TER5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
ARHGEF40Q8TER5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC28.74■■■□□ 2.19
ARHGEF40Q8TER5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC28.74■■■□□ 2.19
ARHGEF40Q8TER5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ARHGEF40Q8TER5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 MIR1233-2-201ENST00000408138 82 ntBASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 MIR1233-1-201ENST00000408722 82 ntBASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 AL590627.1-203ENST00000421194 1026 ntBASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 TSPY22P-201ENST00000427496 604 ntBASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
ARHGEF40Q8TER5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC28.72■■■□□ 2.19
ARHGEF40Q8TER5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC28.72■■■□□ 2.19
ARHGEF40Q8TER5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ARHGEF40Q8TER5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC28.72■■■□□ 2.19
ARHGEF40Q8TER5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ARHGEF40Q8TER5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC28.72■■■□□ 2.19
ARHGEF40Q8TER5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC28.72■■■□□ 2.19
ARHGEF40Q8TER5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
ARHGEF40Q8TER5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
ARHGEF40Q8TER5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC28.72■■■□□ 2.19
ARHGEF40Q8TER5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
ARHGEF40Q8TER5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ARHGEF40Q8TER5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ARHGEF40Q8TER5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ARHGEF40Q8TER5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 IL9RP2-201ENST00000423948 1312 ntBASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 RNF126P1-202ENST00000569893 925 ntBASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 AL136038.4-201ENST00000603606 1261 ntBASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 AL353801.3-201ENST00000609898 542 ntBASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC28.71■■■□□ 2.19
ARHGEF40Q8TER5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC28.7■■■□□ 2.19
ARHGEF40Q8TER5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
ARHGEF40Q8TER5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
ARHGEF40Q8TER5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC28.7■■■□□ 2.19
ARHGEF40Q8TER5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC28.7■■■□□ 2.19
ARHGEF40Q8TER5 SAPCD2P3-201ENST00000455031 850 ntBASIC28.7■■■□□ 2.19
ARHGEF40Q8TER5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
ARHGEF40Q8TER5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC28.7■■■□□ 2.19
ARHGEF40Q8TER5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
ARHGEF40Q8TER5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC28.7■■■□□ 2.19
ARHGEF40Q8TER5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC28.7■■■□□ 2.18
ARHGEF40Q8TER5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
ARHGEF40Q8TER5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC28.7■■■□□ 2.18
ARHGEF40Q8TER5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ARHGEF40Q8TER5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
ARHGEF40Q8TER5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ARHGEF40Q8TER5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC28.69■■■□□ 2.18
ARHGEF40Q8TER5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
ARHGEF40Q8TER5 PLK5-205ENST00000642079 1969 ntBASIC28.69■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms