Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SH3RF2Q8TEC5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3RF2Q8TEC5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3RF2Q8TEC5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
SH3RF2Q8TEC5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3RF2Q8TEC5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3RF2Q8TEC5 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.08■□□□□ 0.81
SH3RF2Q8TEC5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.08■□□□□ 0.81
SH3RF2Q8TEC5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.08■□□□□ 0.81
SH3RF2Q8TEC5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.08■□□□□ 0.81
SH3RF2Q8TEC5 AC128688.1-201ENST00000487626 519 ntBASIC20.08■□□□□ 0.81
SH3RF2Q8TEC5 KRT18P35-201ENST00000510488 1269 ntBASIC20.08■□□□□ 0.81
SH3RF2Q8TEC5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SH3RF2Q8TEC5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SH3RF2Q8TEC5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.08■□□□□ 0.8
SH3RF2Q8TEC5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SH3RF2Q8TEC5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SH3RF2Q8TEC5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 LIN28AP1-201ENST00000429574 405 ntBASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 FAM87A-204ENST00000613235 858 ntBASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 AL590326.2-201ENST00000625139 305 ntBASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.07■□□□□ 0.8
SH3RF2Q8TEC5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3RF2Q8TEC5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3RF2Q8TEC5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SH3RF2Q8TEC5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SH3RF2Q8TEC5 ATP5G1P1-201ENST00000448724 379 ntBASIC20.06■□□□□ 0.8
SH3RF2Q8TEC5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SH3RF2Q8TEC5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SH3RF2Q8TEC5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.06■□□□□ 0.8
SH3RF2Q8TEC5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3RF2Q8TEC5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3RF2Q8TEC5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.06■□□□□ 0.8
SH3RF2Q8TEC5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3RF2Q8TEC5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3RF2Q8TEC5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SH3RF2Q8TEC5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 ARMC10P1-201ENST00000313754 855 ntBASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.05■□□□□ 0.8
SH3RF2Q8TEC5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms