Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
LINC01006Q8NI28 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LINC01006Q8NI28 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.07■□□□□ 0
LINC01006Q8NI28 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.07■□□□□ 0
LINC01006Q8NI28 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 AP000523.1-201ENST00000398242 1049 ntBASIC15.07■□□□□ 0
LINC01006Q8NI28 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.07■□□□□ 0
LINC01006Q8NI28 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LINC01006Q8NI28 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.07■□□□□ 0
LINC01006Q8NI28 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.07■□□□□ 0
LINC01006Q8NI28 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
LINC01006Q8NI28 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.07■□□□□ 0
LINC01006Q8NI28 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.07■□□□□ 0
LINC01006Q8NI28 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.07■□□□□ 0
LINC01006Q8NI28 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.07■□□□□ 0
LINC01006Q8NI28 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LINC01006Q8NI28 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.07■□□□□ 0
LINC01006Q8NI28 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.06■□□□□ 0
LINC01006Q8NI28 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.06■□□□□ 0
LINC01006Q8NI28 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01006Q8NI28 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.06■□□□□ 0
LINC01006Q8NI28 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINC01006Q8NI28 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01006Q8NI28 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.06■□□□□ 0
LINC01006Q8NI28 AL512408.1-201ENST00000569378 2000 ntBASIC15.06■□□□□ 0
LINC01006Q8NI28 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01006Q8NI28 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01006Q8NI28 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
LINC01006Q8NI28 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.06■□□□□ 0
LINC01006Q8NI28 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LINC01006Q8NI28 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01006Q8NI28 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.06■□□□□ 0
LINC01006Q8NI28 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.06■□□□□ 0
LINC01006Q8NI28 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.06■□□□□ 0
LINC01006Q8NI28 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.06■□□□□ 0
LINC01006Q8NI28 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.06■□□□□ 0
LINC01006Q8NI28 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.06■□□□□ 0
LINC01006Q8NI28 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01006Q8NI28 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01006Q8NI28 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINC01006Q8NI28 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LINC01006Q8NI28 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
LINC01006Q8NI28 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
LINC01006Q8NI28 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
LINC01006Q8NI28 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.05■□□□□ 0
LINC01006Q8NI28 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01006Q8NI28 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01006Q8NI28 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.05■□□□□ -0
LINC01006Q8NI28 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.05■□□□□ -0
LINC01006Q8NI28 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.05■□□□□ -0
LINC01006Q8NI28 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01006Q8NI28 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01006Q8NI28 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
LINC01006Q8NI28 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LINC01006Q8NI28 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LINC01006Q8NI28 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LINC01006Q8NI28 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
LINC01006Q8NI28 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.05■□□□□ -0
LINC01006Q8NI28 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LINC01006Q8NI28 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC01006Q8NI28 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01006Q8NI28 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01006Q8NI28 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LINC01006Q8NI28 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LINC01006Q8NI28 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.04■□□□□ -0
LINC01006Q8NI28 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC01006Q8NI28 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01006Q8NI28 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.04■□□□□ -0
LINC01006Q8NI28 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC01006Q8NI28 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC01006Q8NI28 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.04■□□□□ -0
LINC01006Q8NI28 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.04■□□□□ -0
LINC01006Q8NI28 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.04■□□□□ -0
LINC01006Q8NI28 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01006Q8NI28 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC01006Q8NI28 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC01006Q8NI28 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01006Q8NI28 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01006Q8NI28 KRT18P38-201ENST00000449496 1282 ntBASIC15.04■□□□□ -0
LINC01006Q8NI28 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
LINC01006Q8NI28 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.04■□□□□ -0
LINC01006Q8NI28 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.04■□□□□ -0
LINC01006Q8NI28 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.04■□□□□ -0
LINC01006Q8NI28 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.04■□□□□ -0
LINC01006Q8NI28 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.04■□□□□ -0
LINC01006Q8NI28 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms