Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf88Q6PI97 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 AL049812.1-201ENST00000432563 2267 ntBASIC16.81■□□□□ 0.28
C11orf88Q6PI97 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 SLC7A5P1-201ENST00000568957 537 ntBASIC16.81■□□□□ 0.28
C11orf88Q6PI97 AL121832.2-201ENST00000610979 668 ntBASIC16.81■□□□□ 0.28
C11orf88Q6PI97 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 AC008175.2-201ENST00000612840 297 ntBASIC16.81■□□□□ 0.28
C11orf88Q6PI97 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.81■□□□□ 0.28
C11orf88Q6PI97 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
C11orf88Q6PI97 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 TREX1-205ENST00000625293 1783 ntBASIC16.79■□□□□ 0.28
C11orf88Q6PI97 AC018470.1-201ENST00000624790 3129 ntBASIC16.79■□□□□ 0.28
C11orf88Q6PI97 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 POU5F1P4-201ENST00000413175 1085 ntBASIC16.79■□□□□ 0.28
C11orf88Q6PI97 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.79■□□□□ 0.28
C11orf88Q6PI97 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 UBE2DNL-204ENST00000602536 740 ntBASIC16.79■□□□□ 0.28
C11orf88Q6PI97 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 AL691432.2-201ENST00000607222 2038 ntBASIC16.79■□□□□ 0.28
C11orf88Q6PI97 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf88Q6PI97 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.79■□□□□ 0.28
C11orf88Q6PI97 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 OR6D1P-203ENST00000641209 4860 ntBASIC16.78■□□□□ 0.28
C11orf88Q6PI97 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms