Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
CDC42BPAQ5VT25 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC29.38■■■□□ 2.29
CDC42BPAQ5VT25 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
CDC42BPAQ5VT25 ATP5G2P1-201ENST00000433580 426 ntBASIC29.38■■■□□ 2.29
CDC42BPAQ5VT25 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC29.38■■■□□ 2.29
CDC42BPAQ5VT25 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC29.38■■■□□ 2.29
CDC42BPAQ5VT25 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC29.38■■■□□ 2.29
CDC42BPAQ5VT25 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDC42BPAQ5VT25 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC29.38■■■□□ 2.29
CDC42BPAQ5VT25 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CDC42BPAQ5VT25 AL162377.1-201ENST00000618844 1793 ntBASIC29.38■■■□□ 2.29
CDC42BPAQ5VT25 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 AC104417.2-201ENST00000562989 1793 ntBASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 LINC01311-201ENST00000565162 1445 ntBASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 WDR6-223ENST00000627177 207 ntTSL 2 BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC29.37■■■□□ 2.29
CDC42BPAQ5VT25 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
CDC42BPAQ5VT25 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
CDC42BPAQ5VT25 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CDC42BPAQ5VT25 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
CDC42BPAQ5VT25 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CDC42BPAQ5VT25 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
CDC42BPAQ5VT25 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDC42BPAQ5VT25 AL645929.1-201ENST00000420084 975 ntBASIC29.36■■■□□ 2.29
CDC42BPAQ5VT25 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
CDC42BPAQ5VT25 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC29.36■■■□□ 2.29
CDC42BPAQ5VT25 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC29.35■■■□□ 2.29
CDC42BPAQ5VT25 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CDC42BPAQ5VT25 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
CDC42BPAQ5VT25 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC29.35■■■□□ 2.29
CDC42BPAQ5VT25 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC29.35■■■□□ 2.29
CDC42BPAQ5VT25 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
CDC42BPAQ5VT25 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
CDC42BPAQ5VT25 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CDC42BPAQ5VT25 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 ANKRD18DP-204ENST00000455355 1975 ntBASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPAQ5VT25 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPAQ5VT25 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC29.33■■■□□ 2.29
CDC42BPAQ5VT25 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPAQ5VT25 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPAQ5VT25 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPAQ5VT25 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPAQ5VT25 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC29.33■■■□□ 2.29
CDC42BPAQ5VT25 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPAQ5VT25 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPAQ5VT25 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPAQ5VT25 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPAQ5VT25 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPAQ5VT25 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPAQ5VT25 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
CDC42BPAQ5VT25 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPAQ5VT25 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
CDC42BPAQ5VT25 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CDC42BPAQ5VT25 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDC42BPAQ5VT25 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
CDC42BPAQ5VT25 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC29.32■■■□□ 2.28
CDC42BPAQ5VT25 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC29.32■■■□□ 2.28
CDC42BPAQ5VT25 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC29.32■■■□□ 2.28
CDC42BPAQ5VT25 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC29.32■■■□□ 2.28
CDC42BPAQ5VT25 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC29.32■■■□□ 2.28
CDC42BPAQ5VT25 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CDC42BPAQ5VT25 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC29.31■■■□□ 2.28
CDC42BPAQ5VT25 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDC42BPAQ5VT25 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDC42BPAQ5VT25 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms