Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.19□□□□□ -0.462e-6■■□□□ 13.8
NCBP2P52298 CDC45-207ENST00000455750 568 ntTSL 211.76□□□□□ -0.532e-6■■□□□ 13.8
NCBP2P52298 CDC45-203ENST00000407835 2090 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.692e-6■■□□□ 13.8
NCBP2P52298 CDC45-206ENST00000438587 552 ntTSL 46.47□□□□□ -1.372e-6■■□□□ 13.8
NCBP2P52298 PSME2-204ENST00000558931 2754 ntTSL 513.43□□□□□ -0.268e-8■■□□□ 13.8
NCBP2P52298 PSME2-216ENST00000561103 460 ntTSL 310.58□□□□□ -0.728e-8■■□□□ 13.8
NCBP2P52298 KIAA1841-207ENST00000482513 2640 ntTSL 219.25■□□□□ 0.676e-9■■□□□ 13.8
NCBP2P52298 KIAA1841-204ENST00000453186 4472 ntTSL 1 (best)10.48□□□□□ -0.736e-9■■□□□ 13.8
NCBP2P52298 KIAA1841-203ENST00000402291 4516 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.966e-9■■□□□ 13.8
NCBP2P52298 C2orf68-204ENST00000423181 976 ntTSL 1 (best)19.41■□□□□ 0.72e-6■■□□□ 13.8
NCBP2P52298 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.79□□□□□ -0.042e-6■■□□□ 13.8
NCBP2P52298 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.232e-6■■□□□ 13.8
NCBP2P52298 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.361e-6■■□□□ 13.8
NCBP2P52298 MED4-203ENST00000417167 911 ntAPPRIS ALT2 TSL 515.04■□□□□ -01e-6■■□□□ 13.8
NCBP2P52298 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.241e-6■■□□□ 13.8
NCBP2P52298 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.81■□□□□ 0.444e-7■■□□□ 13.8
NCBP2P52298 TRAK2-204ENST00000451703 646 ntTSL 311.37□□□□□ -0.594e-7■■□□□ 13.8
NCBP2P52298 TRAK2-201ENST00000332624 6510 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.844e-7■■□□□ 13.8
NCBP2P52298 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.95e-13■■□□□ 13.8
NCBP2P52298 NDUFV2-208ENST00000577703 854 ntTSL 320.69■□□□□ 0.95e-13■■□□□ 13.8
NCBP2P52298 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.17■□□□□ 0.345e-13■■□□□ 13.8
NCBP2P52298 ATXN1L-203ENST00000569119 428 ntTSL 515.81■□□□□ 0.123e-9■■□□□ 13.8
NCBP2P52298 ATXN1L-201ENST00000427980 7886 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.923e-9■■□□□ 13.8
NCBP2P52298 ATXN1L-202ENST00000565676 445 ntTSL 35.27□□□□□ -1.573e-9■■□□□ 13.8
NCBP2P52298 AC124068.2-201ENST00000569473 1109 ntBASIC13.58□□□□□ -0.244e-18■■□□□ 13.8
NCBP2P52298 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC7.17□□□□□ -1.261e-27■■□□□ 13.8
NCBP2P52298 SRRM1-206ENST00000466910 799 ntTSL 217.54■□□□□ 0.42e-6■■□□□ 13.8
NCBP2P52298 SRRM1-207ENST00000468822 768 ntTSL 213.73□□□□□ -0.212e-6■■□□□ 13.8
NCBP2P52298 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.312e-6■■□□□ 13.8
NCBP2P52298 SRRM1-223ENST00000600523 575 ntTSL 512.09□□□□□ -0.472e-6■■□□□ 13.8
NCBP2P52298 SRRM1-221ENST00000593639 563 ntTSL 58.09□□□□□ -1.112e-6■■□□□ 13.8
NCBP2P52298 SRRM1-205ENST00000462710 2624 ntTSL 57.93□□□□□ -1.142e-6■■□□□ 13.8
NCBP2P52298 SRRM1-217ENST00000490543 673 ntTSL 57.91□□□□□ -1.142e-6■■□□□ 13.8
NCBP2P52298 SRRM1-212ENST00000479034 2671 ntTSL 56.76□□□□□ -1.332e-6■■□□□ 13.8
NCBP2P52298 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.62e-6■■□□□ 13.8
NCBP2P52298 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.682e-6■■□□□ 13.8
NCBP2P52298 SRRM1-211ENST00000478890 480 ntTSL 31.04□□□□□ -2.242e-6■■□□□ 13.8
NCBP2P52298 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.761e-7■■□□□ 13.8
NCBP2P52298 UBE2Q1-207ENST00000497453 830 ntTSL 516.49■□□□□ 0.231e-7■■□□□ 13.8
NCBP2P52298 ZFP36L1-206ENST00000557086 727 ntTSL 215.29■□□□□ 0.042e-6■■□□□ 13.8
NCBP2P52298 ZFP36L1-203ENST00000553375 633 ntTSL 214.98□□□□□ -0.012e-6■■□□□ 13.8
NCBP2P52298 ZFP36L1-205ENST00000557022 577 ntTSL 514.24□□□□□ -0.132e-6■■□□□ 13.8
NCBP2P52298 WDR6-213ENST00000473238 568 ntTSL 318■□□□□ 0.471e-6■■□□□ 13.8
NCBP2P52298 WDR6-214ENST00000488572 610 ntTSL 417.9■□□□□ 0.461e-6■■□□□ 13.8
NCBP2P52298 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.8■□□□□ 0.281e-6■■□□□ 13.8
NCBP2P52298 WDR6-206ENST00000438660 852 ntTSL 516.21■□□□□ 0.191e-6■■□□□ 13.8
NCBP2P52298 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.97■□□□□ 0.151e-6■■□□□ 13.8
NCBP2P52298 WDR6-216ENST00000489684 1155 ntTSL 215.14■□□□□ 0.011e-6■■□□□ 13.8
NCBP2P52298 WDR6-205ENST00000429900 563 ntTSL 515.03■□□□□ -01e-6■■□□□ 13.8
NCBP2P52298 WDR6-210ENST00000462064 589 ntTSL 515.03■□□□□ -01e-6■■□□□ 13.8
NCBP2P52298 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC12.38□□□□□ -0.431e-6■■□□□ 13.8
NCBP2P52298 WDR6-221ENST00000610967 4259 ntTSL 1 (best) BASIC11.66□□□□□ -0.541e-6■■□□□ 13.8
NCBP2P52298 WDR6-204ENST00000420783 3656 ntTSL 1 (best)11.33□□□□□ -0.591e-6■■□□□ 13.8
NCBP2P52298 WDR6-211ENST00000471162 3565 ntTSL 1 (best)11.24□□□□□ -0.611e-6■■□□□ 13.8
NCBP2P52298 WDR6-208ENST00000452875 3916 ntTSL 1 (best)10.9□□□□□ -0.671e-6■■□□□ 13.8
NCBP2P52298 WDR6-220ENST00000608424 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.711e-6■■□□□ 13.8
NCBP2P52298 SSUH2-205ENST00000420394 1634 ntTSL 1 (best)19.29■□□□□ 0.684e-10■■□□□ 13.8
NCBP2P52298 SSUH2-204ENST00000415132 1645 ntTSL 518.2■□□□□ 0.54e-10■■□□□ 13.8
NCBP2P52298 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.374e-10■■□□□ 13.8
NCBP2P52298 SSUH2-201ENST00000317371 2561 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.564e-10■■□□□ 13.8
NCBP2P52298 SSUH2-207ENST00000435138 2632 ntTSL 211.3□□□□□ -0.64e-10■■□□□ 13.8
NCBP2P52298 SSUH2-208ENST00000455157 3219 ntTSL 210.66□□□□□ -0.74e-10■■□□□ 13.8
NCBP2P52298 SSUH2-210ENST00000466215 492 ntTSL 310.01□□□□□ -0.814e-10■■□□□ 13.8
NCBP2P52298 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.49■□□□□ 0.394e-21■■□□□ 13.8
NCBP2P52298 LRCH4-205ENST00000485554 774 ntTSL 316.07■□□□□ 0.162e-7■■□□□ 13.8
NCBP2P52298 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.073e-13■■□□□ 13.8
NCBP2P52298 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.14□□□□□ -0.473e-13■■□□□ 13.8
NCBP2P52298 TAX1BP1-206ENST00000422800 570 ntTSL 37.88□□□□□ -1.153e-13■■□□□ 13.8
NCBP2P52298 TAX1BP1-204ENST00000416801 2221 ntTSL 24.65□□□□□ -1.663e-13■■□□□ 13.8
NCBP2P52298 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.743e-13■■□□□ 13.8
NCBP2P52298 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.763e-13■■□□□ 13.8
NCBP2P52298 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.823e-13■■□□□ 13.8
NCBP2P52298 TAX1BP1-205ENST00000418691 641 ntTSL 42.83□□□□□ -1.963e-13■■□□□ 13.8
NCBP2P52298 TAX1BP1-211ENST00000490455 591 ntTSL 22.25□□□□□ -2.053e-13■■□□□ 13.8
NCBP2P52298 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.37□□□□□ -0.273e-7■■□□□ 13.8
NCBP2P52298 CSTF3-204ENST00000524556 558 ntTSL 313.11□□□□□ -0.313e-7■■□□□ 13.8
NCBP2P52298 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.34□□□□□ -0.433e-7■■□□□ 13.8
NCBP2P52298 CSTF3-205ENST00000524775 434 ntTSL 411.06□□□□□ -0.643e-7■■□□□ 13.8
NCBP2P52298 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC9.65□□□□□ -0.863e-7■■□□□ 13.8
NCBP2P52298 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.483e-7■■□□□ 13.8
NCBP2P52298 CSTF3-207ENST00000526480 479 ntTSL 35.56□□□□□ -1.523e-7■■□□□ 13.8
NCBP2P52298 RHBG-208ENST00000620376 1984 ntTSL 220.65■□□□□ 0.91e-8■■□□□ 13.8
NCBP2P52298 RHBG-201ENST00000451864 1927 ntTSL 220.17■□□□□ 0.821e-8■■□□□ 13.8
NCBP2P52298 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.171e-8■■□□□ 13.8
NCBP2P52298 RHBG-205ENST00000612897 1862 ntTSL 1 (best)15.97■□□□□ 0.151e-8■■□□□ 13.8
NCBP2P52298 RHBG-206ENST00000613460 1912 ntTSL 1 (best)13.19□□□□□ -0.31e-8■■□□□ 13.8
NCBP2P52298 RHBG-207ENST00000618120 2424 ntTSL 212.71□□□□□ -0.381e-8■■□□□ 13.8
NCBP2P52298 ACADM-211ENST00000528016 546 ntTSL 416.2■□□□□ 0.185e-12■■□□□ 13.8
NCBP2P52298 RABGGTB-201ENST00000319942 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.885e-12■■□□□ 13.8
NCBP2P52298 RABGGTB-214ENST00000497648 1319 ntTSL 26.55□□□□□ -1.365e-12■■□□□ 13.8
NCBP2P52298 RABGGTB-209ENST00000473406 721 ntTSL 54.44□□□□□ -1.75e-12■■□□□ 13.8
NCBP2P52298 RABGGTB-213ENST00000496055 3863 ntTSL 23.75□□□□□ -1.815e-12■■□□□ 13.8
NCBP2P52298 RABGGTB-210ENST00000485459 788 ntTSL 53.17□□□□□ -1.95e-12■■□□□ 13.8
NCBP2P52298 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.24□□□□□ -2.055e-12■■□□□ 13.8
NCBP2P52298 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC12.06□□□□□ -0.484e-11■■□□□ 13.7
NCBP2P52298 MAP4K3-204ENST00000429397 689 ntTSL 322.16■■□□□ 1.141e-11■■□□□ 13.7
NCBP2P52298 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.553e-7■■□□□ 13.7
NCBP2P52298 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.223e-7■■□□□ 13.7
NCBP2P52298 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.436e-8■■□□□ 13.7
NCBP2P52298 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.24■■□□□ 1.315e-7■■□□□ 13.7
Retrieved 100 of 18,329 protein–RNA pairs in 103.9 ms