Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A3P43003 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A3P43003 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SLC1A3P43003 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SLC1A3P43003 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC1A3P43003 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A3P43003 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
SLC1A3P43003 AC026366.1-201ENST00000488803 879 ntBASIC17.78■□□□□ 0.44
SLC1A3P43003 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC1A3P43003 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A3P43003 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A3P43003 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A3P43003 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A3P43003 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A3P43003 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A3P43003 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SLC1A3P43003 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A3P43003 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A3P43003 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC1A3P43003 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC1A3P43003 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC1A3P43003 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A3P43003 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
SLC1A3P43003 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A3P43003 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A3P43003 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A3P43003 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC1A3P43003 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A3P43003 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.77■□□□□ 0.44
SLC1A3P43003 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A3P43003 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC1A3P43003 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SLC1A3P43003 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A3P43003 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A3P43003 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC1A3P43003 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.77■□□□□ 0.43
SLC1A3P43003 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.77■□□□□ 0.43
SLC1A3P43003 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC1A3P43003 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC1A3P43003 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC1A3P43003 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC1A3P43003 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SLC1A3P43003 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC1A3P43003 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SLC1A3P43003 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
SLC1A3P43003 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SLC1A3P43003 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
SLC1A3P43003 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SLC1A3P43003 AC120498.9-201ENST00000339021 3867 ntBASIC17.76■□□□□ 0.43
SLC1A3P43003 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC1A3P43003 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC1A3P43003 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC1A3P43003 KRT17P3-201ENST00000420566 1262 ntBASIC17.76■□□□□ 0.43
SLC1A3P43003 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC1A3P43003 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC1A3P43003 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC1A3P43003 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SLC1A3P43003 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC1A3P43003 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
SLC1A3P43003 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC1A3P43003 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC1A3P43003 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC1A3P43003 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A3P43003 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SLC1A3P43003 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC1A3P43003 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC1A3P43003 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SLC1A3P43003 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SLC1A3P43003 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC1A3P43003 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC1A3P43003 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC1A3P43003 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SLC1A3P43003 AL032819.2-201ENST00000624543 2162 ntBASIC17.75■□□□□ 0.43
SLC1A3P43003 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms