Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL1P22362 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.67■□□□□ 0.26
CCL1P22362 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL1P22362 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL1P22362 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL1P22362 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL1P22362 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL1P22362 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL1P22362 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
CCL1P22362 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCL1P22362 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL1P22362 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL1P22362 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.66■□□□□ 0.26
CCL1P22362 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL1P22362 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL1P22362 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL1P22362 AL109923.1-201ENST00000618799 583 ntBASIC16.66■□□□□ 0.26
CCL1P22362 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCL1P22362 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.66■□□□□ 0.26
CCL1P22362 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCL1P22362 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CCL1P22362 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL1P22362 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL1P22362 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCL1P22362 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL1P22362 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CCL1P22362 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CCL1P22362 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CCL1P22362 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCL1P22362 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CCL1P22362 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCL1P22362 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCL1P22362 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL1P22362 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.65■□□□□ 0.26
CCL1P22362 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL1P22362 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CCL1P22362 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL1P22362 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.65■□□□□ 0.26
CCL1P22362 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CCL1P22362 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL1P22362 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.65■□□□□ 0.26
CCL1P22362 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCL1P22362 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL1P22362 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCL1P22362 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL1P22362 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CCL1P22362 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL1P22362 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL1P22362 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL1P22362 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCL1P22362 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL1P22362 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL1P22362 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CCL1P22362 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCL1P22362 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL1P22362 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.64■□□□□ 0.25
CCL1P22362 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL1P22362 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL1P22362 UNC93B4-201ENST00000505679 747 ntBASIC16.64■□□□□ 0.25
CCL1P22362 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.64■□□□□ 0.25
CCL1P22362 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.64■□□□□ 0.25
CCL1P22362 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL1P22362 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL1P22362 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL1P22362 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL1P22362 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL1P22362 FEM1AP3-201ENST00000403722 1741 ntBASIC16.64■□□□□ 0.25
CCL1P22362 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL1P22362 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL1P22362 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL1P22362 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms