Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.39□□□□□ -0.11
SMIM17P0DL12 AL031432.3-201ENST00000607698 485 ntBASIC14.39□□□□□ -0.11
SMIM17P0DL12 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM17P0DL12 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM17P0DL12 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM17P0DL12 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM17P0DL12 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM17P0DL12 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM17P0DL12 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM17P0DL12 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM17P0DL12 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM17P0DL12 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM17P0DL12 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM17P0DL12 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM17P0DL12 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM17P0DL12 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.39□□□□□ -0.11
SMIM17P0DL12 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM17P0DL12 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM17P0DL12 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SMIM17P0DL12 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM17P0DL12 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM17P0DL12 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.38□□□□□ -0.11
SMIM17P0DL12 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
SMIM17P0DL12 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.38□□□□□ -0.11
SMIM17P0DL12 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SMIM17P0DL12 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.38□□□□□ -0.11
SMIM17P0DL12 SUDS3P1-201ENST00000505831 966 ntBASIC14.38□□□□□ -0.11
SMIM17P0DL12 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.38□□□□□ -0.11
SMIM17P0DL12 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 AC087633.2-202ENST00000565166 1439 ntBASIC14.38□□□□□ -0.11
SMIM17P0DL12 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM17P0DL12 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SMIM17P0DL12 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
SMIM17P0DL12 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM17P0DL12 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SMIM17P0DL12 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SMIM17P0DL12 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SMIM17P0DL12 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.38□□□□□ -0.11
SMIM17P0DL12 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM17P0DL12 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM17P0DL12 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SMIM17P0DL12 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SMIM17P0DL12 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SMIM17P0DL12 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.37□□□□□ -0.11
SMIM17P0DL12 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SMIM17P0DL12 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.37□□□□□ -0.11
SMIM17P0DL12 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.37□□□□□ -0.11
SMIM17P0DL12 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 AC009237.14-201ENST00000609975 1594 ntBASIC14.37□□□□□ -0.11
SMIM17P0DL12 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SMIM17P0DL12 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SMIM17P0DL12 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM17P0DL12 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.37□□□□□ -0.11
SMIM17P0DL12 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM17P0DL12 FZD10-202ENST00000539839 3282 ntBASIC14.37□□□□□ -0.11
SMIM17P0DL12 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms