Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SP9P0CG40 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.12■□□□□ 0.65
SP9P0CG40 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.11■□□□□ 0.65
SP9P0CG40 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SP9P0CG40 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.11■□□□□ 0.65
SP9P0CG40 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SP9P0CG40 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SP9P0CG40 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.11■□□□□ 0.65
SP9P0CG40 DRAXINP1-201ENST00000437611 948 ntBASIC19.11■□□□□ 0.65
SP9P0CG40 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.11■□□□□ 0.65
SP9P0CG40 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SP9P0CG40 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.11■□□□□ 0.65
SP9P0CG40 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SP9P0CG40 AL117328.2-201ENST00000624617 1940 ntBASIC19.11■□□□□ 0.65
SP9P0CG40 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SP9P0CG40 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.11■□□□□ 0.65
SP9P0CG40 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SP9P0CG40 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SP9P0CG40 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SP9P0CG40 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SP9P0CG40 HLA-A-201ENST00000376802 1334 ntBASIC19.1■□□□□ 0.65
SP9P0CG40 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.1■□□□□ 0.65
SP9P0CG40 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SP9P0CG40 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SP9P0CG40 AC012615.1-201ENST00000565797 1299 ntBASIC19.1■□□□□ 0.65
SP9P0CG40 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SP9P0CG40 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.1■□□□□ 0.65
SP9P0CG40 AL121912.1-201ENST00000603683 238 ntBASIC19.1■□□□□ 0.65
SP9P0CG40 AC024243.1-201ENST00000609234 778 ntBASIC19.1■□□□□ 0.65
SP9P0CG40 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.1■□□□□ 0.65
SP9P0CG40 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.1■□□□□ 0.65
SP9P0CG40 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SP9P0CG40 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.1■□□□□ 0.65
SP9P0CG40 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.1■□□□□ 0.65
SP9P0CG40 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SP9P0CG40 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SP9P0CG40 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SP9P0CG40 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SP9P0CG40 AC233723.2-201ENST00000623798 2106 ntBASIC19.09■□□□□ 0.65
SP9P0CG40 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.09■□□□□ 0.65
SP9P0CG40 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SP9P0CG40 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.09■□□□□ 0.65
SP9P0CG40 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SP9P0CG40 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SP9P0CG40 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SP9P0CG40 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SP9P0CG40 AL590627.1-203ENST00000421194 1026 ntBASIC19.09■□□□□ 0.65
SP9P0CG40 TSPY22P-201ENST00000427496 604 ntBASIC19.09■□□□□ 0.65
SP9P0CG40 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.09■□□□□ 0.65
SP9P0CG40 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.09■□□□□ 0.65
SP9P0CG40 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.09■□□□□ 0.65
SP9P0CG40 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.09■□□□□ 0.65
SP9P0CG40 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.09■□□□□ 0.65
SP9P0CG40 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.09■□□□□ 0.65
SP9P0CG40 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.09■□□□□ 0.65
SP9P0CG40 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SP9P0CG40 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SP9P0CG40 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SP9P0CG40 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SP9P0CG40 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.09■□□□□ 0.65
SP9P0CG40 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SP9P0CG40 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.08■□□□□ 0.65
SP9P0CG40 AC092720.2-201ENST00000602388 1665 ntBASIC19.08■□□□□ 0.65
SP9P0CG40 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SP9P0CG40 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SP9P0CG40 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.08■□□□□ 0.65
SP9P0CG40 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SP9P0CG40 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SP9P0CG40 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SP9P0CG40 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SP9P0CG40 PMS2P1-201ENST00000431037 1228 ntBASIC19.08■□□□□ 0.64
SP9P0CG40 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.08■□□□□ 0.64
SP9P0CG40 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.08■□□□□ 0.64
SP9P0CG40 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.08■□□□□ 0.64
SP9P0CG40 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.08■□□□□ 0.64
SP9P0CG40 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.08■□□□□ 0.64
SP9P0CG40 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.08■□□□□ 0.64
SP9P0CG40 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SP9P0CG40 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.08■□□□□ 0.64
SP9P0CG40 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SP9P0CG40 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SP9P0CG40 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.08■□□□□ 0.64
SP9P0CG40 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SP9P0CG40 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SP9P0CG40 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SP9P0CG40 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.07■□□□□ 0.64
SP9P0CG40 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SP9P0CG40 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SP9P0CG40 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SP9P0CG40 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SP9P0CG40 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SP9P0CG40 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SP9P0CG40 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SP9P0CG40 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SP9P0CG40 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SP9P0CG40 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.07■□□□□ 0.64
SP9P0CG40 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.07■□□□□ 0.64
SP9P0CG40 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SP9P0CG40 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.07■□□□□ 0.64
SP9P0CG40 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms