Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 AC053503.5-201ENST00000601508 636 ntBASIC14.54□□□□□ -0.08
HLA-DQA1P01909 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 RARRES2P11-201ENST00000635158 484 ntBASIC14.54□□□□□ -0.08
HLA-DQA1P01909 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 ABALON-201ENST00000629058 1903 ntBASIC14.54□□□□□ -0.08
HLA-DQA1P01909 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 AC067852.2-201ENST00000590513 2313 ntBASIC14.54□□□□□ -0.08
HLA-DQA1P01909 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 AC012313.1-201ENST00000593393 3059 ntBASIC14.54□□□□□ -0.08
HLA-DQA1P01909 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DQA1P01909 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 AP001271.2-201ENST00000624018 1556 ntBASIC14.53□□□□□ -0.08
HLA-DQA1P01909 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 AC126544.1-201ENST00000580842 1059 ntBASIC14.53□□□□□ -0.08
HLA-DQA1P01909 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA1P01909 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.52□□□□□ -0.08
HLA-DQA1P01909 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DQA1P01909 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.52□□□□□ -0.08
HLA-DQA1P01909 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DQA1P01909 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
HLA-DQA1P01909 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DQA1P01909 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.52□□□□□ -0.08
HLA-DQA1P01909 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.52□□□□□ -0.08
HLA-DQA1P01909 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DQA1P01909 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DQA1P01909 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 AC008764.7-201ENST00000593779 1081 ntBASIC14.52□□□□□ -0.09
HLA-DQA1P01909 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.52□□□□□ -0.09
HLA-DQA1P01909 AC110285.6-201ENST00000617652 491 ntBASIC14.52□□□□□ -0.09
HLA-DQA1P01909 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms