Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM3O75382 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM3O75382 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRIM3O75382 AC018553.1-201ENST00000616682 1458 ntBASIC18.02■□□□□ 0.48
TRIM3O75382 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM3O75382 PHGDH-210ENST00000641115 1638 ntBASIC18.02■□□□□ 0.48
TRIM3O75382 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM3O75382 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM3O75382 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM3O75382 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM3O75382 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM3O75382 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM3O75382 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM3O75382 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.02■□□□□ 0.48
TRIM3O75382 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM3O75382 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM3O75382 TFP1-202ENST00000475455 1573 ntBASIC18.02■□□□□ 0.48
TRIM3O75382 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM3O75382 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM3O75382 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.02■□□□□ 0.48
TRIM3O75382 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM3O75382 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.02■□□□□ 0.48
TRIM3O75382 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM3O75382 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM3O75382 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM3O75382 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM3O75382 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM3O75382 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM3O75382 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM3O75382 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM3O75382 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM3O75382 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
TRIM3O75382 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRIM3O75382 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TRIM3O75382 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRIM3O75382 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 KRT16P5-201ENST00000455284 522 ntBASIC18.01■□□□□ 0.47
TRIM3O75382 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 Z99916.2-201ENST00000604037 246 ntBASIC18.01■□□□□ 0.47
TRIM3O75382 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.01■□□□□ 0.47
TRIM3O75382 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM3O75382 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM3O75382 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM3O75382 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM3O75382 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM3O75382 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
TRIM3O75382 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18■□□□□ 0.47
TRIM3O75382 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18■□□□□ 0.47
TRIM3O75382 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM3O75382 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM3O75382 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRIM3O75382 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM3O75382 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM3O75382 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM3O75382 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
TRIM3O75382 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM3O75382 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM3O75382 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM3O75382 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18■□□□□ 0.47
TRIM3O75382 MIR718-201ENST00000390190 70 ntBASIC18■□□□□ 0.47
TRIM3O75382 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18■□□□□ 0.47
TRIM3O75382 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18■□□□□ 0.47
TRIM3O75382 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18■□□□□ 0.47
TRIM3O75382 RARRES2P10-201ENST00000564312 460 ntBASIC18■□□□□ 0.47
TRIM3O75382 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRIM3O75382 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18■□□□□ 0.47
TRIM3O75382 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18■□□□□ 0.47
TRIM3O75382 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18■□□□□ 0.47
TRIM3O75382 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM3O75382 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18■□□□□ 0.47
TRIM3O75382 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18■□□□□ 0.47
TRIM3O75382 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM3O75382 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM3O75382 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM3O75382 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM3O75382 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TRIM3O75382 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM3O75382 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRIM3O75382 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM3O75382 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRIM3O75382 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TRIM3O75382 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM3O75382 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms