Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.35■□□□□ 0.37
PFDN1O60925 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PFDN1O60925 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PFDN1O60925 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PFDN1O60925 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.34■□□□□ 0.37
PFDN1O60925 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PFDN1O60925 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PFDN1O60925 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.34■□□□□ 0.37
PFDN1O60925 AC103702.1-201ENST00000548801 2630 ntBASIC17.34■□□□□ 0.37
PFDN1O60925 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.34■□□□□ 0.37
PFDN1O60925 AC008764.6-201ENST00000595909 2069 ntBASIC17.34■□□□□ 0.37
PFDN1O60925 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
PFDN1O60925 AC011551.1-201ENST00000614101 683 ntBASIC17.34■□□□□ 0.37
PFDN1O60925 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.34■□□□□ 0.37
PFDN1O60925 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.34■□□□□ 0.37
PFDN1O60925 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.34■□□□□ 0.37
PFDN1O60925 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PFDN1O60925 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PFDN1O60925 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PFDN1O60925 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PFDN1O60925 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PFDN1O60925 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PFDN1O60925 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PFDN1O60925 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PFDN1O60925 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.33■□□□□ 0.37
PFDN1O60925 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PFDN1O60925 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.33■□□□□ 0.37
PFDN1O60925 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PFDN1O60925 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
PFDN1O60925 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PFDN1O60925 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.33■□□□□ 0.36
PFDN1O60925 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PFDN1O60925 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PFDN1O60925 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PFDN1O60925 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PFDN1O60925 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.33■□□□□ 0.36
PFDN1O60925 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.33■□□□□ 0.36
PFDN1O60925 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PFDN1O60925 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PFDN1O60925 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PFDN1O60925 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PFDN1O60925 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PFDN1O60925 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PFDN1O60925 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PFDN1O60925 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PFDN1O60925 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.33■□□□□ 0.36
PFDN1O60925 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PFDN1O60925 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PFDN1O60925 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PFDN1O60925 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PFDN1O60925 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PFDN1O60925 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PFDN1O60925 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PFDN1O60925 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
PFDN1O60925 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PFDN1O60925 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PFDN1O60925 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.32■□□□□ 0.36
PFDN1O60925 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PFDN1O60925 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PFDN1O60925 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.32■□□□□ 0.36
PFDN1O60925 AC007029.1-201ENST00000604183 313 ntBASIC17.32■□□□□ 0.36
PFDN1O60925 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PFDN1O60925 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.32■□□□□ 0.36
PFDN1O60925 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.32■□□□□ 0.36
PFDN1O60925 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PFDN1O60925 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.32■□□□□ 0.36
PFDN1O60925 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PFDN1O60925 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
PFDN1O60925 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.32■□□□□ 0.36
PFDN1O60925 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PFDN1O60925 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.31■□□□□ 0.36
PFDN1O60925 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PFDN1O60925 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms