Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.71■■□□□ 1.07
ACTN4O43707 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.71■■□□□ 1.07
ACTN4O43707 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
ACTN4O43707 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACTN4O43707 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACTN4O43707 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.71■■□□□ 1.07
ACTN4O43707 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACTN4O43707 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACTN4O43707 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACTN4O43707 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.71■■□□□ 1.07
ACTN4O43707 AC008403.3-201ENST00000598924 454 ntBASIC21.71■■□□□ 1.07
ACTN4O43707 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ACTN4O43707 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACTN4O43707 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACTN4O43707 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.71■■□□□ 1.07
ACTN4O43707 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACTN4O43707 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ACTN4O43707 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
ACTN4O43707 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ACTN4O43707 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
ACTN4O43707 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ACTN4O43707 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ACTN4O43707 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.7■■□□□ 1.07
ACTN4O43707 CROCCP3-202ENST00000420820 1947 ntBASIC21.7■■□□□ 1.07
ACTN4O43707 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
ACTN4O43707 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.7■■□□□ 1.07
ACTN4O43707 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ACTN4O43707 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.7■■□□□ 1.06
ACTN4O43707 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ACTN4O43707 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.7■■□□□ 1.06
ACTN4O43707 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.7■■□□□ 1.06
ACTN4O43707 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.7■■□□□ 1.06
ACTN4O43707 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
ACTN4O43707 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.7■■□□□ 1.06
ACTN4O43707 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.7■■□□□ 1.06
ACTN4O43707 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ACTN4O43707 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ACTN4O43707 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
ACTN4O43707 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.7■■□□□ 1.06
ACTN4O43707 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ACTN4O43707 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.69■■□□□ 1.06
ACTN4O43707 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
ACTN4O43707 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.69■■□□□ 1.06
ACTN4O43707 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 POM121L13P-201ENST00000422362 380 ntBASIC21.69■■□□□ 1.06
ACTN4O43707 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ACTN4O43707 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
ACTN4O43707 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ACTN4O43707 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
ACTN4O43707 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ACTN4O43707 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.69■■□□□ 1.06
ACTN4O43707 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ACTN4O43707 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACTN4O43707 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACTN4O43707 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACTN4O43707 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACTN4O43707 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ACTN4O43707 TUBB8P6-201ENST00000436895 1288 ntBASIC21.68■■□□□ 1.06
ACTN4O43707 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.68■■□□□ 1.06
ACTN4O43707 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.68■■□□□ 1.06
ACTN4O43707 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ACTN4O43707 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACTN4O43707 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACTN4O43707 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACTN4O43707 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ACTN4O43707 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.68■■□□□ 1.06
ACTN4O43707 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ACTN4O43707 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
ACTN4O43707 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
ACTN4O43707 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ACTN4O43707 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ACTN4O43707 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ACTN4O43707 AC006333.2-201ENST00000607957 2099 ntBASIC21.68■■□□□ 1.06
ACTN4O43707 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.68■■□□□ 1.06
ACTN4O43707 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ACTN4O43707 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ACTN4O43707 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ACTN4O43707 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
ACTN4O43707 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ACTN4O43707 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
ACTN4O43707 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.67■■□□□ 1.06
ACTN4O43707 FP475955.4-201ENST00000623131 1990 ntBASIC21.67■■□□□ 1.06
ACTN4O43707 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms