Protein–RNA interactions for Protein: O43653

PSCA, Prostate stem cell antigen, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSCAO43653 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PSCAO43653 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.15□□□□□ -0.3
PSCAO43653 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PSCAO43653 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PSCAO43653 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PSCAO43653 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.15□□□□□ -0.3
PSCAO43653 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PSCAO43653 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PSCAO43653 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PSCAO43653 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PSCAO43653 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PSCAO43653 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PSCAO43653 AC018553.1-201ENST00000616682 1458 ntBASIC13.15□□□□□ -0.3
PSCAO43653 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PSCAO43653 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PSCAO43653 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
PSCAO43653 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
PSCAO43653 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
PSCAO43653 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
PSCAO43653 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.14□□□□□ -0.31
PSCAO43653 HTR7P1-201ENST00000538670 1336 ntBASIC13.14□□□□□ -0.31
PSCAO43653 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC13.14□□□□□ -0.31
PSCAO43653 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
PSCAO43653 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PSCAO43653 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.14□□□□□ -0.31
PSCAO43653 AC012618.2-201ENST00000428058 849 ntBASIC13.14□□□□□ -0.31
PSCAO43653 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.14□□□□□ -0.31
PSCAO43653 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 RARRES2P10-201ENST00000564312 460 ntBASIC13.14□□□□□ -0.31
PSCAO43653 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 AC073314.1-201ENST00000568729 2216 ntBASIC13.14□□□□□ -0.31
PSCAO43653 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PSCAO43653 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 AC116351.2-201ENST00000606540 1585 ntBASIC13.14□□□□□ -0.31
PSCAO43653 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
PSCAO43653 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PSCAO43653 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
PSCAO43653 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
PSCAO43653 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
PSCAO43653 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
PSCAO43653 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC13.13□□□□□ -0.31
PSCAO43653 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC13.13□□□□□ -0.31
PSCAO43653 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.13□□□□□ -0.31
PSCAO43653 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PSCAO43653 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 RPS2P55-201ENST00000397318 883 ntBASIC13.13□□□□□ -0.31
PSCAO43653 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.13□□□□□ -0.31
PSCAO43653 AC107956.1-201ENST00000494359 873 ntBASIC13.13□□□□□ -0.31
PSCAO43653 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.13□□□□□ -0.31
PSCAO43653 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.13□□□□□ -0.31
PSCAO43653 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.13□□□□□ -0.31
PSCAO43653 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.13□□□□□ -0.31
PSCAO43653 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
PSCAO43653 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.13□□□□□ -0.31
PSCAO43653 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PSCAO43653 KRT17P2-201ENST00000300992 1314 ntBASIC13.13□□□□□ -0.31
PSCAO43653 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.13□□□□□ -0.31
PSCAO43653 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.13□□□□□ -0.31
PSCAO43653 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
PSCAO43653 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PSCAO43653 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC13.12□□□□□ -0.31
PSCAO43653 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
PSCAO43653 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
PSCAO43653 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PSCAO43653 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.12□□□□□ -0.31
PSCAO43653 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms