Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
CLDN5O00501 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CLDN5O00501 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.45■□□□□ 0.86
CLDN5O00501 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.45■□□□□ 0.86
CLDN5O00501 AC130371.2-201ENST00000619443 611 ntBASIC20.45■□□□□ 0.86
CLDN5O00501 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CLDN5O00501 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN5O00501 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.45■□□□□ 0.86
CLDN5O00501 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN5O00501 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.45■□□□□ 0.86
CLDN5O00501 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN5O00501 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN5O00501 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN5O00501 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.44■□□□□ 0.86
CLDN5O00501 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CLDN5O00501 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.44■□□□□ 0.86
CLDN5O00501 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN5O00501 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CLDN5O00501 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.44■□□□□ 0.86
CLDN5O00501 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.44■□□□□ 0.86
CLDN5O00501 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN5O00501 AC087499.1-201ENST00000418141 1075 ntBASIC20.44■□□□□ 0.86
CLDN5O00501 AC004951.3-201ENST00000418645 1148 ntBASIC20.44■□□□□ 0.86
CLDN5O00501 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN5O00501 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.44■□□□□ 0.86
CLDN5O00501 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.44■□□□□ 0.86
CLDN5O00501 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.44■□□□□ 0.86
CLDN5O00501 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN5O00501 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN5O00501 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN5O00501 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.44■□□□□ 0.86
CLDN5O00501 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CLDN5O00501 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CLDN5O00501 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CLDN5O00501 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN5O00501 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CLDN5O00501 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN5O00501 SDHAP1-207ENST00000440850 2000 ntBASIC20.43■□□□□ 0.86
CLDN5O00501 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN5O00501 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CLDN5O00501 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN5O00501 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN5O00501 AC211429.1-201ENST00000415277 523 ntBASIC20.43■□□□□ 0.86
CLDN5O00501 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.43■□□□□ 0.86
CLDN5O00501 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.43■□□□□ 0.86
CLDN5O00501 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.43■□□□□ 0.86
CLDN5O00501 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.43■□□□□ 0.86
CLDN5O00501 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.43■□□□□ 0.86
CLDN5O00501 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.43■□□□□ 0.86
CLDN5O00501 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN5O00501 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN5O00501 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN5O00501 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.43■□□□□ 0.86
CLDN5O00501 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN5O00501 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN5O00501 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN5O00501 KRT8P41-201ENST00000533985 1514 ntBASIC20.43■□□□□ 0.86
CLDN5O00501 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.42■□□□□ 0.86
CLDN5O00501 MMP23A-201ENST00000234610 1017 ntBASIC20.42■□□□□ 0.86
CLDN5O00501 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN5O00501 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.42■□□□□ 0.86
CLDN5O00501 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.42■□□□□ 0.86
CLDN5O00501 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN5O00501 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.42■□□□□ 0.86
CLDN5O00501 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.42■□□□□ 0.86
CLDN5O00501 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.42■□□□□ 0.86
CLDN5O00501 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
CLDN5O00501 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN5O00501 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.42■□□□□ 0.86
CLDN5O00501 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
CLDN5O00501 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN5O00501 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN5O00501 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CLDN5O00501 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN5O00501 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.41■□□□□ 0.86
CLDN5O00501 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.41■□□□□ 0.86
CLDN5O00501 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN5O00501 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN5O00501 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CLDN5O00501 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.41■□□□□ 0.86
CLDN5O00501 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.41■□□□□ 0.86
CLDN5O00501 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.41■□□□□ 0.86
CLDN5O00501 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.41■□□□□ 0.86
CLDN5O00501 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.41■□□□□ 0.86
CLDN5O00501 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CLDN5O00501 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.41■□□□□ 0.86
CLDN5O00501 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN5O00501 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CLDN5O00501 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.41■□□□□ 0.86
CLDN5O00501 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN5O00501 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
CLDN5O00501 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
CLDN5O00501 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.4■□□□□ 0.86
CLDN5O00501 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN5O00501 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN5O00501 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CLDN5O00501 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN5O00501 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN5O00501 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN5O00501 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms