Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.92■□□□□ 0.62
TAF4O00268 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.92■□□□□ 0.62
TAF4O00268 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TAF4O00268 FAM87A-204ENST00000613235 858 ntBASIC18.92■□□□□ 0.62
TAF4O00268 AL356652.1-201ENST00000615962 565 ntBASIC18.92■□□□□ 0.62
TAF4O00268 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TAF4O00268 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
TAF4O00268 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.92■□□□□ 0.62
TAF4O00268 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.92■□□□□ 0.62
TAF4O00268 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TAF4O00268 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.92■□□□□ 0.62
TAF4O00268 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.92■□□□□ 0.62
TAF4O00268 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TAF4O00268 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.91■□□□□ 0.62
TAF4O00268 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
TAF4O00268 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TAF4O00268 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.91■□□□□ 0.62
TAF4O00268 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TAF4O00268 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.91■□□□□ 0.62
TAF4O00268 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TAF4O00268 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.91■□□□□ 0.62
TAF4O00268 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TAF4O00268 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TAF4O00268 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TAF4O00268 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.91■□□□□ 0.62
TAF4O00268 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.91■□□□□ 0.62
TAF4O00268 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TAF4O00268 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TAF4O00268 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.91■□□□□ 0.62
TAF4O00268 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TAF4O00268 AFG3L1P-217ENST00000557444 2447 ntBASIC18.91■□□□□ 0.62
TAF4O00268 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TAF4O00268 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TAF4O00268 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.91■□□□□ 0.62
TAF4O00268 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.91■□□□□ 0.62
TAF4O00268 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TAF4O00268 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TAF4O00268 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TAF4O00268 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TAF4O00268 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TAF4O00268 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TAF4O00268 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TAF4O00268 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.9■□□□□ 0.62
TAF4O00268 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TAF4O00268 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
TAF4O00268 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.9■□□□□ 0.62
TAF4O00268 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.9■□□□□ 0.62
TAF4O00268 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TAF4O00268 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TAF4O00268 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.9■□□□□ 0.62
TAF4O00268 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.9■□□□□ 0.62
TAF4O00268 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TAF4O00268 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.9■□□□□ 0.62
TAF4O00268 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TAF4O00268 AL121906.2-201ENST00000621597 723 ntBASIC18.9■□□□□ 0.62
TAF4O00268 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TAF4O00268 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.9■□□□□ 0.62
TAF4O00268 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TAF4O00268 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TAF4O00268 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TAF4O00268 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TAF4O00268 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TAF4O00268 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TAF4O00268 AC026471.6-201ENST00000622954 1905 ntBASIC18.9■□□□□ 0.62
TAF4O00268 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.9■□□□□ 0.62
TAF4O00268 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TAF4O00268 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.9■□□□□ 0.62
TAF4O00268 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TAF4O00268 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TAF4O00268 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TAF4O00268 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.89■□□□□ 0.62
TAF4O00268 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.89■□□□□ 0.62
TAF4O00268 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TAF4O00268 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TAF4O00268 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
TAF4O00268 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TAF4O00268 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.89■□□□□ 0.61
TAF4O00268 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.89■□□□□ 0.61
TAF4O00268 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.89■□□□□ 0.61
TAF4O00268 MESTP1-201ENST00000404287 994 ntBASIC18.89■□□□□ 0.61
TAF4O00268 PGM5P4-201ENST00000421970 445 ntBASIC18.89■□□□□ 0.61
TAF4O00268 AP000347.1-202ENST00000435868 847 ntBASIC18.89■□□□□ 0.61
TAF4O00268 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 HCG4P8-203ENST00000443049 980 ntBASIC18.89■□□□□ 0.61
TAF4O00268 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms