Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 AC093536.1-201ENST00000569153 554 ntBASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 AL162727.3-201ENST00000635661 2787 ntBASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 TPR-209ENST00000613151 2478 ntTSL 5 BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 COMP-202ENST00000425807 2292 ntTSL 2 BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CHKB-CPT1BH3BT56 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 ACE-204ENST00000428043 5120 ntTSL 2 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 CICP6-201ENST00000457191 2729 ntBASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 HES6-205ENST00000409356 528 ntTSL 2 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 NOC2LP2-201ENST00000407594 1944 ntBASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHKB-CPT1BH3BT56 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 AC018695.7-201ENST00000624587 2492 ntBASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 AC099778.1-201ENST00000568593 1911 ntBASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHKB-CPT1BH3BT56 DET1-207ENST00000564406 2315 ntTSL 2 BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms