Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RBFOX3A6NFN3 TEX21P-204ENST00000641479 1693 ntBASIC15.27■□□□□ 0.03
RBFOX3A6NFN3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.27■□□□□ 0.03
RBFOX3A6NFN3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBFOX3A6NFN3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RBFOX3A6NFN3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBFOX3A6NFN3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.27■□□□□ 0.03
RBFOX3A6NFN3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RBFOX3A6NFN3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.27■□□□□ 0.03
RBFOX3A6NFN3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBFOX3A6NFN3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBFOX3A6NFN3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBFOX3A6NFN3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RBFOX3A6NFN3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RBFOX3A6NFN3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RBFOX3A6NFN3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RBFOX3A6NFN3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 AL138724.1-201ENST00000606771 1088 ntBASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RBFOX3A6NFN3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 GUSBP5-201ENST00000418136 578 ntBASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 AC136469.2-201ENST00000623944 1028 ntBASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 SIRPAP1-201ENST00000448467 1770 ntBASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.25■□□□□ 0.03
RBFOX3A6NFN3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms