Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 HMGA1P5-201ENST00000412453 271 ntBASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 DUX4L26-201ENST00000489078 1255 ntBASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TBC1D3FA6NER0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.27■□□□□ 0.67
TBC1D3FA6NER0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TBC1D3FA6NER0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TBC1D3FA6NER0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.26■□□□□ 0.67
TBC1D3FA6NER0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D3FA6NER0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 AC007663.1-201ENST00000438948 1240 ntBASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 TSPY17P-201ENST00000450329 467 ntBASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 KRT8P41-201ENST00000533985 1514 ntBASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms