Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHISA3A0PJX4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 IRX1P1-201ENST00000438849 1838 ntBASIC16.87■□□□□ 0.29
SHISA3A0PJX4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 AC116351.2-201ENST00000606540 1585 ntBASIC16.87■□□□□ 0.29
SHISA3A0PJX4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 AC023632.3-201ENST00000521633 145 ntBASIC16.87■□□□□ 0.29
SHISA3A0PJX4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 AC100791.3-201ENST00000617619 330 ntBASIC16.87■□□□□ 0.29
SHISA3A0PJX4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 AC020763.4-201ENST00000623414 4170 ntBASIC16.87■□□□□ 0.29
SHISA3A0PJX4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHISA3A0PJX4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 AC142381.2-201ENST00000566120 298 ntBASIC16.86■□□□□ 0.29
SHISA3A0PJX4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHISA3A0PJX4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 KRT18P68-201ENST00000392293 1000 ntBASIC16.85■□□□□ 0.29
SHISA3A0PJX4 KRT19P1-201ENST00000405746 1186 ntBASIC16.85■□□□□ 0.29
SHISA3A0PJX4 AC007322.4-201ENST00000509611 723 ntBASIC16.85■□□□□ 0.29
SHISA3A0PJX4 RARRES2P4-201ENST00000514074 484 ntBASIC16.85■□□□□ 0.29
SHISA3A0PJX4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms