Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 AC005181.1-201ENST00000604782 1256 ntBASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV21A0A0B4J279 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 GPX1P1-201ENST00000388829 606 ntBASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 AC093787.1-201ENST00000450396 207 ntBASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV21A0A0B4J279 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 AC141586.3-201ENST00000562166 1838 ntBASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 TFP1-202ENST00000475455 1573 ntBASIC14.37□□□□□ -0.11
TRAV21A0A0B4J279 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms