Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV34A0A0B4J273 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV34A0A0B4J273 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV34A0A0B4J273 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRAV34A0A0B4J273 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 AC009113.1-201ENST00000570267 2443 ntBASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 KRT16P6-202ENST00000425692 1426 ntBASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 KRT8P17-201ENST00000453110 1448 ntBASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 PTBP1P-201ENST00000554374 1601 ntBASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TRAV34A0A0B4J273 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 AC087633.2-202ENST00000565166 1439 ntBASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.93□□□□□ -0.02
TRAV34A0A0B4J273 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms