Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 CYP2T3P-201ENST00000601990 817 ntBASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV8-4A0A0B4J246 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 AL137784.2-201ENST00000607332 1000 ntBASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRAV8-4A0A0B4J246 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 HLA-G-202ENST00000376815 851 ntBASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 HLA-G-203ENST00000376818 1127 ntBASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 AC005181.1-201ENST00000604782 1256 ntBASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 KRT16P6-202ENST00000425692 1426 ntBASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms