Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-7A0A0A0MS04 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV6-7A0A0A0MS04 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 AL354751.1-201ENST00000412768 1863 ntBASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 TFP1-202ENST00000475455 1573 ntBASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 AC018470.1-201ENST00000624790 3129 ntBASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-7A0A0A0MS04 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 AC004911.1-201ENST00000416316 871 ntBASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRBV6-7A0A0A0MS04 AC120498.9-201ENST00000339021 3867 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms