Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 KF456110.1-201ENST00000641105 385 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 FP325330.3-201ENST00000623760 9537 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 PUM3-202ENST00000397885 2321 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 AC083902.2-201ENST00000511828 10086 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ATG4C-203ENST00000371120 2890 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC00494-201ENST00000416742 3544 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 LIG4-202ENST00000405925 4065 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 TWF1-211ENST00000552521 3012 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 GRIA1-213ENST00000521843 3069 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ERG-204ENST00000398907 4809 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF962P-201ENST00000443465 3140 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 FAM13A-220ENST00000513837 2590 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 GTF2H1-214ENST00000534641 2587 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 AL080317.3-201ENST00000607434 4315 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 LCMT1-AS2-201ENST00000562280 2601 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 PLA2G2C-202ENST00000429261 3249 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 P4HA1-202ENST00000307116 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 P4HA1-203ENST00000373008 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ADGRF2-201ENST00000296862 2127 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 BNIPL-203ENST00000368931 2143 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 RHBDD1-202ENST00000392062 5151 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ACTBP13-201ENST00000423971 3959 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 CD22-202ENST00000341773 2755 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 MCOLN3-203ENST00000370589 2756 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 AC127459.1-201ENST00000563129 2768 ntBASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 AC116913.1-201ENST00000565387 2168 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 MEIS1-212ENST00000495021 2836 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF410-224ENST00000615736 1551 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 L3MBTL3-203ENST00000368139 4148 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 TTC12-210ENST00000483239 2240 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF700-201ENST00000254321 2882 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 PTPN20-201ENST00000374218 2872 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 SOCS4-202ENST00000395472 6779 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 PPP2R2B-205ENST00000394414 2262 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AC079949.2-201ENST00000617117 2933 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 MSH2-202ENST00000406134 3628 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ADD2-204ENST00000407644 3741 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 SLC12A6-207ENST00000558667 3725 ntAPPRIS ALT1 TSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 HSH2D-208ENST00000616645 2366 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms