RNA–Protein interactions for RNA: ENST00000622089.4

ITSN2-213, Transcript of intersectin 2, humanhuman

TSL 5 BASIC

Gene ITSN2, Length 5,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-213ENST00000622089 DCAF8L2P0C7V8 631 aa15.48■□□□□ 0.07
ITSN2-213ENST00000622089 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0
ITSN2-213ENST00000622089 SUPT5HO00267 1087 aaKnown RBP14.84□□□□□ -0.03
ITSN2-213ENST00000622089 NISCHQ9Y2I1 1504 aa14.6□□□□□ -0.07
ITSN2-213ENST00000622089 APLP2Q06481 763 aa14.52□□□□□ -0.08
ITSN2-213ENST00000622089 SHROOM4Q9ULL8 1493 aa14.43□□□□□ -0.1
ITSN2-213ENST00000622089 CCER1Q8TC90 406 aaPredicted RBP14.38□□□□□ -0.11
ITSN2-213ENST00000622089 FAM9AQ8IZU1 332 aaPredicted RBP14.35□□□□□ -0.11
ITSN2-213ENST00000622089 ERICH6Q7L0X2 663 aa14.35□□□□□ -0.11
ITSN2-213ENST00000622089 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
ITSN2-213ENST00000622089 CENPBP07199 599 aaPredicted RBP14.31□□□□□ -0.12
ITSN2-213ENST00000622089 ZEB1P37275 1124 aaPredicted RBP14.28□□□□□ -0.12
ITSN2-213ENST00000622089 MYT1Q01538 1121 aa14.27□□□□□ -0.13
ITSN2-213ENST00000622089 PCGF6Q9BYE7 350 aa14.08□□□□□ -0.15
ITSN2-213ENST00000622089 NEFLP07196 543 aa14.01□□□□□ -0.17
ITSN2-213ENST00000622089 TTBK1Q5TCY1 1321 aaPredicted RBP13.93□□□□□ -0.18
ITSN2-213ENST00000622089 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
ITSN2-213ENST00000622089 ATP1B4Q9UN42 357 aaPredicted RBP13.75□□□□□ -0.21
ITSN2-213ENST00000622089 RANGAP1P46060 587 aaPredicted RBP13.73□□□□□ -0.21
ITSN2-213ENST00000622089 UBTFP17480 764 aaKnown RBP13.72□□□□□ -0.21
ITSN2-213ENST00000622089 YTHDC1Q96MU7 727 aaKnown RBP13.7□□□□□ -0.22
ITSN2-213ENST00000622089 DAXXQ9UER7 740 aaPredicted RBP13.68□□□□□ -0.22
ITSN2-213ENST00000622089 TRIM26Q12899 539 aaPredicted RBP13.6□□□□□ -0.23
ITSN2-213ENST00000622089 HRCP23327 699 aa13.46□□□□□ -0.25
ITSN2-213ENST00000622089 RTL5Q5HYW3 569 aaPredicted RBP13.38□□□□□ -0.27
ITSN2-213ENST00000622089 ZNF316A6NFI3 1004 aaPredicted RBP13.34□□□□□ -0.27
ITSN2-213ENST00000622089 POLR3GLQ9BT43 218 aa13.32□□□□□ -0.28
ITSN2-213ENST00000622089 PPARGC1BQ86YN6 1023 aaKnown RBP13.31□□□□□ -0.28
ITSN2-213ENST00000622089 MYT1LQ9UL68 1186 aa13.28□□□□□ -0.28
ITSN2-213ENST00000622089 ITGAEP38570 1179 aa13.25□□□□□ -0.29
ITSN2-213ENST00000622089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.24□□□□□ -0.29
ITSN2-213ENST00000622089 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
ITSN2-213ENST00000622089 CLSPNQ9HAW4 1339 aa13.21□□□□□ -0.29
ITSN2-213ENST00000622089 DIEXFQ68CQ4 756 aaKnown RBP13.17□□□□□ -0.3
ITSN2-213ENST00000622089 SLC4A1APQ9BWU0 796 aaKnown RBP13.1□□□□□ -0.31
ITSN2-213ENST00000622089 CHIC1Q5VXU3 224 aa13.1□□□□□ -0.31
ITSN2-213ENST00000622089 CDK11AQ9UQ88 783 aaPredicted RBP13.06□□□□□ -0.32
ITSN2-213ENST00000622089 LOC105371045A0A1W2PR82 267 aa13.05□□□□□ -0.32
ITSN2-213ENST00000622089 CNGB1Q14028 1251 aaPredicted RBP13.04□□□□□ -0.32
ITSN2-213ENST00000622089 ZBTB47Q9UFB7 747 aaPredicted RBP13.03□□□□□ -0.32
ITSN2-213ENST00000622089 ANP32CO43423 234 aa13.01□□□□□ -0.33
ITSN2-213ENST00000622089 FAM50AQ14320 339 aaKnown RBP12.98□□□□□ -0.33
ITSN2-213ENST00000622089 TRIM52Q96A61 297 aa12.97□□□□□ -0.33
ITSN2-213ENST00000622089 GTF3C3Q9Y5Q9 886 aa12.93□□□□□ -0.34
ITSN2-213ENST00000622089 NEUROD1Q13562 356 aa12.88□□□□□ -0.35
ITSN2-213ENST00000622089 ANP32AP39687 249 aaKnown RBP12.88□□□□□ -0.35
ITSN2-213ENST00000622089 BCANQ96GW7 911 aa12.88□□□□□ -0.35
ITSN2-213ENST00000622089 CANXP27824 592 aaKnown RBP12.87□□□□□ -0.35
ITSN2-213ENST00000622089 NEFMP07197 916 aa12.84□□□□□ -0.35
ITSN2-213ENST00000622089 ANP32BQ92688 251 aaKnown RBP12.79□□□□□ -0.36
ITSN2-213ENST00000622089 ACIN1Q9UKV3 1341 aaKnown RBP12.77□□□□□ -0.36
ITSN2-213ENST00000622089 ZNF326Q5BKZ1 582 aaKnown RBP12.76□□□□□ -0.37
ITSN2-213ENST00000622089 GLIPR1L2Q4G1C9 344 aa12.72□□□□□ -0.37
ITSN2-213ENST00000622089 UPF2Q9HAU5 1272 aaKnown RBP12.68□□□□□ -0.38
ITSN2-213ENST00000622089 SLC24A1O60721 1099 aa12.65□□□□□ -0.38
ITSN2-213ENST00000622089 NPM2Q86SE8 214 aaKnown RBP12.63□□□□□ -0.39
ITSN2-213ENST00000622089 HSP90AA1P07900 732 aaKnown RBP12.62□□□□□ -0.39
ITSN2-213ENST00000622089 EIF5BO60841 1220 aaKnown RBP12.58□□□□□ -0.4
ITSN2-213ENST00000622089 FKBP8Q14318 412 aa12.57□□□□□ -0.4
ITSN2-213ENST00000622089 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
ITSN2-213ENST00000622089 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.56□□□□□ -0.4
ITSN2-213ENST00000622089 BCL11AQ9H165 835 aa12.56□□□□□ -0.4
ITSN2-213ENST00000622089 CSRNP3Q8WYN3 585 aa12.53□□□□□ -0.4
ITSN2-213ENST00000622089 DCAF1Q9Y4B6 1507 aa12.5□□□□□ -0.41
ITSN2-213ENST00000622089 FBLN2P98095 1184 aa12.49□□□□□ -0.41
ITSN2-213ENST00000622089 HNRNPUQ00839 825 aaKnown RBP eCLIP12.49□□□□□ -0.41
ITSN2-213ENST00000622089 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.41
ITSN2-213ENST00000622089 CCDC136Q96JN2 1154 aa12.46□□□□□ -0.41
ITSN2-213ENST00000622089 ZNF777Q9ULD5 760 aaPredicted RBP12.45□□□□□ -0.42
ITSN2-213ENST00000622089 ABCC9O60706 1549 aa12.44□□□□□ -0.42
ITSN2-213ENST00000622089 ANP32EQ9BTT0 268 aa12.44□□□□□ -0.42
ITSN2-213ENST00000622089 DDRGK1Q96HY6 314 aa12.43□□□□□ -0.42
ITSN2-213ENST00000622089 ESF1Q9H501 851 aaKnown RBP12.43□□□□□ -0.42
ITSN2-213ENST00000622089 P3H3Q8IVL6 736 aa12.42□□□□□ -0.42
ITSN2-213ENST00000622089 FAM9BQ8IZU0 186 aa12.42□□□□□ -0.42
ITSN2-213ENST00000622089 WDR43Q15061 677 aaKnown RBP eCLIP12.41□□□□□ -0.42
ITSN2-213ENST00000622089 TMC1Q8TDI8 760 aa12.4□□□□□ -0.42
ITSN2-213ENST00000622089 MYH16Q9H6N6 1097 aa12.39□□□□□ -0.43
ITSN2-213ENST00000622089 BECN1Q14457 450 aa12.38□□□□□ -0.43
ITSN2-213ENST00000622089 STAG3Q9UJ98 1225 aa12.38□□□□□ -0.43
ITSN2-213ENST00000622089 DDX10Q13206 875 aaKnown RBP12.37□□□□□ -0.43
ITSN2-213ENST00000622089 NBR1Q14596 966 aa12.36□□□□□ -0.43
ITSN2-213ENST00000622089 CDK11BP21127 795 aaKnown RBP12.36□□□□□ -0.43
ITSN2-213ENST00000622089 NCLP19338 710 aaKnown RBP12.34□□□□□ -0.43
ITSN2-213ENST00000622089 ARID3CA6NKF2 412 aa12.34□□□□□ -0.43
ITSN2-213ENST00000622089 CHGAP10645 457 aaKnown RBP12.33□□□□□ -0.44
ITSN2-213ENST00000622089 GOLGA6L22H0YM25 854 aa12.32□□□□□ -0.44
ITSN2-213ENST00000622089 MRS2Q9HD23 443 aa12.32□□□□□ -0.44
ITSN2-213ENST00000622089 TRIM44Q96DX7 344 aaPredicted RBP12.31□□□□□ -0.44
ITSN2-213ENST00000622089 TNNT2P45379 298 aaPredicted RBP12.29□□□□□ -0.44
ITSN2-213ENST00000622089 NPM1P06748 294 aaKnown RBP eCLIP12.26□□□□□ -0.45
ITSN2-213ENST00000622089 SALL2Q9Y467 1007 aaPredicted RBP12.26□□□□□ -0.45
ITSN2-213ENST00000622089 ARXQ96QS3 562 aa12.24□□□□□ -0.45
ITSN2-213ENST00000622089 PPM1GO15355 546 aaPredicted RBP12.24□□□□□ -0.45
ITSN2-213ENST00000622089 EIF4G2P78344 907 aaKnown RBP eCLIP12.24□□□□□ -0.45
ITSN2-213ENST00000622089 CASC1Q6TDU7 716 aa12.23□□□□□ -0.45
ITSN2-213ENST00000622089 TSPY4P0CV99 314 aa12.23□□□□□ -0.45
ITSN2-213ENST00000622089 TSPY10P0CW01 314 aa12.23□□□□□ -0.45
ITSN2-213ENST00000622089 MTUS2Q5JR59 1369 aa12.2□□□□□ -0.46
ITSN2-213ENST00000622089 ERICH6BQ5W0A0 696 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms