RNA–Protein interactions for RNA: ENST00000602725.5

PTP4A2-218, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A2, Length 3,353 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-218ENST00000602725 NISCHQ9Y2I1 1504 aa15.96■□□□□ 0.15
PTP4A2-218ENST00000602725 HRCP23327 699 aa14.23□□□□□ -0.13
PTP4A2-218ENST00000602725 SHROOM4Q9ULL8 1493 aa13.98□□□□□ -0.17
PTP4A2-218ENST00000602725 SUPT5HO00267 1087 aaKnown RBP13.94□□□□□ -0.18
PTP4A2-218ENST00000602725 PCGF6Q9BYE7 350 aa13.87□□□□□ -0.19
PTP4A2-218ENST00000602725 MYO15BQ96JP2 1530 aa13.87□□□□□ -0.19
PTP4A2-218ENST00000602725 PPARGC1BQ86YN6 1023 aaKnown RBP13.83□□□□□ -0.2
PTP4A2-218ENST00000602725 PELP1Q8IZL8 1130 aaKnown RBP13.82□□□□□ -0.2
PTP4A2-218ENST00000602725 CHIC1Q5VXU3 224 aa13.79□□□□□ -0.2
PTP4A2-218ENST00000602725 DCAF1Q9Y4B6 1507 aa13.68□□□□□ -0.22
PTP4A2-218ENST00000602725 ZCCHC6Q5VYS8 1495 aaKnown RBP13.6□□□□□ -0.23
PTP4A2-218ENST00000602725 CCDC180Q9P1Z9 1646 aa13.53□□□□□ -0.24
PTP4A2-218ENST00000602725 TRIM26Q12899 539 aaPredicted RBP13.51□□□□□ -0.25
PTP4A2-218ENST00000602725 ZEB1P37275 1124 aaPredicted RBP13.45□□□□□ -0.26
PTP4A2-218ENST00000602725 SCAF1Q9H7N4 1312 aaKnown RBP13.42□□□□□ -0.26
PTP4A2-218ENST00000602725 LOC105371045A0A1W2PR82 267 aa13.4□□□□□ -0.26
PTP4A2-218ENST00000602725 MYT1Q01538 1121 aa13.31□□□□□ -0.28
PTP4A2-218ENST00000602725 ACIN1Q9UKV3 1341 aaKnown RBP13.13□□□□□ -0.31
PTP4A2-218ENST00000602725 DCAF8L2P0C7V8 631 aa13.12□□□□□ -0.31
PTP4A2-218ENST00000602725 NEUROD1Q13562 356 aa13.05□□□□□ -0.32
PTP4A2-218ENST00000602725 CENPBP07199 599 aaPredicted RBP13□□□□□ -0.33
PTP4A2-218ENST00000602725 GTF3C3Q9Y5Q9 886 aa12.99□□□□□ -0.33
PTP4A2-218ENST00000602725 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
PTP4A2-218ENST00000602725 ABCC9O60706 1549 aa12.93□□□□□ -0.34
PTP4A2-218ENST00000602725 DIEXFQ68CQ4 756 aaKnown RBP12.9□□□□□ -0.34
PTP4A2-218ENST00000602725 FAM9AQ8IZU1 332 aaPredicted RBP12.87□□□□□ -0.35
PTP4A2-218ENST00000602725 CCER1Q8TC90 406 aaPredicted RBP12.87□□□□□ -0.35
PTP4A2-218ENST00000602725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.85□□□□□ -0.35
PTP4A2-218ENST00000602725 RSF1Q96T23 1441 aaPredicted RBP12.82□□□□□ -0.36
PTP4A2-218ENST00000602725 RB1CC1Q8TDY2 1594 aa12.77□□□□□ -0.36
PTP4A2-218ENST00000602725 EHMT2Q96KQ7 1210 aa12.74□□□□□ -0.37
PTP4A2-218ENST00000602725 ZNF316A6NFI3 1004 aaPredicted RBP12.67□□□□□ -0.38
PTP4A2-218ENST00000602725 YTHDC1Q96MU7 727 aaKnown RBP12.61□□□□□ -0.39
PTP4A2-218ENST00000602725 SCRIBQ14160 1630 aa12.6□□□□□ -0.39
PTP4A2-218ENST00000602725 WRNQ14191 1432 aaPredicted RBP eCLIP12.6□□□□□ -0.39
PTP4A2-218ENST00000602725 MIER1Q8N108 512 aa12.54□□□□□ -0.4
PTP4A2-218ENST00000602725 TTBK1Q5TCY1 1321 aaPredicted RBP12.49□□□□□ -0.41
PTP4A2-218ENST00000602725 CLSPNQ9HAW4 1339 aa12.49□□□□□ -0.41
PTP4A2-218ENST00000602725 CEP162Q5TB80 1403 aa12.47□□□□□ -0.41
PTP4A2-218ENST00000602725 EIF4G1Q04637 1599 aaKnown RBP12.44□□□□□ -0.42
PTP4A2-218ENST00000602725 MROH2BQ7Z745 1585 aa12.43□□□□□ -0.42
PTP4A2-218ENST00000602725 CECR2Q9BXF3 1484 aa12.42□□□□□ -0.42
PTP4A2-218ENST00000602725 TNIKQ9UKE5 1360 aa12.42□□□□□ -0.42
PTP4A2-218ENST00000602725 WIZO95785 1651 aa12.4□□□□□ -0.42
PTP4A2-218ENST00000602725 ANP32EQ9BTT0 268 aa12.39□□□□□ -0.43
PTP4A2-218ENST00000602725 SUPT16HQ9Y5B9 1047 aaKnown RBP12.38□□□□□ -0.43
PTP4A2-218ENST00000602725 BAZ1AQ9NRL2 1556 aaPredicted RBP12.37□□□□□ -0.43
PTP4A2-218ENST00000602725 CCDC88BA6NC98 1476 aa12.33□□□□□ -0.43
PTP4A2-218ENST00000602725 TSHZ2Q9NRE2 1034 aa12.33□□□□□ -0.44
PTP4A2-218ENST00000602725 BCL11AQ9H165 835 aa12.32□□□□□ -0.44
PTP4A2-218ENST00000602725 EEA1Q15075 1411 aa12.32□□□□□ -0.44
PTP4A2-218ENST00000602725 ABCC8Q09428 1581 aa12.3□□□□□ -0.44
PTP4A2-218ENST00000602725 HNRNPUL2Q1KMD3 747 aaKnown RBP12.29□□□□□ -0.44
PTP4A2-218ENST00000602725 SOGA1O94964 1423 aa12.28□□□□□ -0.44
PTP4A2-218ENST00000602725 UBTFP17480 764 aaKnown RBP12.27□□□□□ -0.45
PTP4A2-218ENST00000602725 CSRNP3Q8WYN3 585 aa12.27□□□□□ -0.45
PTP4A2-218ENST00000602725 GOLGA3Q08378 1498 aa12.26□□□□□ -0.45
PTP4A2-218ENST00000602725 NACADO15069 1562 aa12.24□□□□□ -0.45
PTP4A2-218ENST00000602725 TOP2AP11388 1531 aaKnown RBP12.21□□□□□ -0.46
PTP4A2-218ENST00000602725 RUSC2Q8N2Y8 1516 aa12.19□□□□□ -0.46
PTP4A2-218ENST00000602725 SMARCA2P51531 1590 aa12.16□□□□□ -0.46
PTP4A2-218ENST00000602725 VPS8Q8N3P4 1428 aa12.15□□□□□ -0.46
PTP4A2-218ENST00000602725 CEP164Q9UPV0 1460 aa12.14□□□□□ -0.47
PTP4A2-218ENST00000602725 CLIP1P30622 1438 aa12.13□□□□□ -0.47
PTP4A2-218ENST00000602725 DHX57Q6P158 1386 aaKnown RBP12.13□□□□□ -0.47
PTP4A2-218ENST00000602725 APLP2Q06481 763 aa12.13□□□□□ -0.47
PTP4A2-218ENST00000602725 KIF21BO75037 1637 aa12.13□□□□□ -0.47
PTP4A2-218ENST00000602725 SMARCA4P51532 1647 aa12.06□□□□□ -0.48
PTP4A2-218ENST00000602725 BAZ1BQ9UIG0 1483 aaKnown RBP12.06□□□□□ -0.48
PTP4A2-218ENST00000602725 BCANQ96GW7 911 aa12.05□□□□□ -0.48
PTP4A2-218ENST00000602725 RBM19Q9Y4C8 960 aaKnown RBP12.04□□□□□ -0.48
PTP4A2-218ENST00000602725 FKBP8Q14318 412 aa12.04□□□□□ -0.48
PTP4A2-218ENST00000602725 KCNH8Q96L42 1107 aa12□□□□□ -0.49
PTP4A2-218ENST00000602725 NEFLP07196 543 aa11.99□□□□□ -0.49
PTP4A2-218ENST00000602725 CUX2O14529 1486 aa11.96□□□□□ -0.49
PTP4A2-218ENST00000602725 RAPGEF2Q9Y4G8 1499 aa11.96□□□□□ -0.49
PTP4A2-218ENST00000602725 SYNJ1O43426 1573 aa11.96□□□□□ -0.5
PTP4A2-218ENST00000602725 RRBP1Q9P2E9 1410 aaKnown RBP11.94□□□□□ -0.5
PTP4A2-218ENST00000602725 MSH5O43196 834 aa11.91□□□□□ -0.5
PTP4A2-218ENST00000602725 FANCIQ9NVI1 1328 aa11.89□□□□□ -0.51
PTP4A2-218ENST00000602725 RANGAP1P46060 587 aaPredicted RBP11.89□□□□□ -0.51
PTP4A2-218ENST00000602725 ITGAEP38570 1179 aa11.87□□□□□ -0.51
PTP4A2-218ENST00000602725 KANK4Q5T7N3 995 aaPredicted RBP11.87□□□□□ -0.51
PTP4A2-218ENST00000602725 ARAP1Q96P48 1450 aa11.87□□□□□ -0.51
PTP4A2-218ENST00000602725 CCER2I3L3R5 266 aa11.87□□□□□ -0.51
PTP4A2-218ENST00000602725 DDX10Q13206 875 aaKnown RBP11.87□□□□□ -0.51
PTP4A2-218ENST00000602725 CCNB3Q8WWL7 1395 aa11.86□□□□□ -0.51
PTP4A2-218ENST00000602725 MAPKBP1O60336 1514 aa11.86□□□□□ -0.51
PTP4A2-218ENST00000602725 MYT1LQ9UL68 1186 aa11.85□□□□□ -0.51
PTP4A2-218ENST00000602725 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
PTP4A2-218ENST00000602725 ERICH3Q5RHP9 1530 aa11.84□□□□□ -0.51
PTP4A2-218ENST00000602725 PPP1R15AO75807 674 aaPredicted RBP11.84□□□□□ -0.51
PTP4A2-218ENST00000602725 TRIM52Q96A61 297 aa11.82□□□□□ -0.52
PTP4A2-218ENST00000602725 RAB3GAP2Q9H2M9 1393 aa11.82□□□□□ -0.52
PTP4A2-218ENST00000602725 WDR97A6NE52 1622 aa11.82□□□□□ -0.52
PTP4A2-218ENST00000602725 CDK11AQ9UQ88 783 aaPredicted RBP11.81□□□□□ -0.52
PTP4A2-218ENST00000602725 ANP32CO43423 234 aa11.81□□□□□ -0.52
PTP4A2-218ENST00000602725 PEG3Q9GZU2 1588 aa11.8□□□□□ -0.52
PTP4A2-218ENST00000602725 PRXQ9BXM0 1461 aa11.79□□□□□ -0.52
PTP4A2-218ENST00000602725 TIMELESSQ9UNS1 1208 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms